Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30310.Seq
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060765-1|AAL28313.1|  108|Drosophila melanogaster GH22881p pro...    47   2e-05
AE014134-1175|AAN10602.2|  108|Drosophila melanogaster CG17377-P...    47   2e-05
AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-P...    47   2e-05
AE014134-1173|AAF52442.3|  173|Drosophila melanogaster CG17377-P...    47   2e-05
X67704-2|CAA47942.1|  265|Drosophila melanogaster sperm protein ...    31   1.6  
AY118617-1|AAM49986.1|  265|Drosophila melanogaster LP10995p pro...    31   1.6  
AY060667-1|AAL28215.1|  334|Drosophila melanogaster GH09231p pro...    31   1.6  
AE014297-4222|AAF56780.1|  265|Drosophila melanogaster CG18396-P...    31   1.6  
AE014297-4221|AAF56779.1|  334|Drosophila melanogaster CG11719-P...    31   1.6  
X67704-1|CAA47941.1|  334|Drosophila melanogaster sperm protein ...    29   3.8  
X98401-1|CAA67051.1|  398|Drosophila melanogaster phosphotyrosyl...    29   5.0  
AY060614-1|AAL28162.1|  398|Drosophila melanogaster GH04025p pro...    29   5.0  
AY051503-1|AAK92927.1| 2028|Drosophila melanogaster GH15471p pro...    29   5.0  
AF454347-1|AAL87864.1|  617|Drosophila melanogaster unconvention...    29   5.0  
AE014297-2146|ABI31171.1| 2160|Drosophila melanogaster CG31045-P...    29   5.0  
AE014297-2145|AAN13695.2| 2194|Drosophila melanogaster CG31045-P...    29   5.0  
AE014297-2143|AAF55271.3| 2148|Drosophila melanogaster CG31045-P...    29   5.0  
AE014134-597|AAF51115.1|  398|Drosophila melanogaster CG3289-PA ...    29   5.0  
AY119029-1|AAM50889.1|  507|Drosophila melanogaster LP05465p pro...    29   6.6  
AE014134-2443|AAF53364.2|  620|Drosophila melanogaster CG8942-PA...    29   6.6  

>AY060765-1|AAL28313.1|  108|Drosophila melanogaster GH22881p
           protein.
          Length = 108

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +2

Query: 509 KSRELRGGIMYYSCHCXKRNGLQHXXRRTGCRG 607
           +SRELR GIMY +C C KRNGLQ    R+ C+G
Sbjct: 14  RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQG 46


>AE014134-1175|AAN10602.2|  108|Drosophila melanogaster CG17377-PB,
           isoform B protein.
          Length = 108

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +2

Query: 509 KSRELRGGIMYYSCHCXKRNGLQHXXRRTGCRG 607
           +SRELR GIMY +C C KRNGLQ    R+ C+G
Sbjct: 14  RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQG 46


>AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-PC,
           isoform C protein.
          Length = 287

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +2

Query: 509 KSRELRGGIMYYSCHCXKRNGLQHXXRRTGCRG 607
           +SRELR GIMY +C C KRNGLQ    R+ C+G
Sbjct: 14  RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQG 46


>AE014134-1173|AAF52442.3|  173|Drosophila melanogaster CG17377-PA,
           isoform A protein.
          Length = 173

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +2

Query: 509 KSRELRGGIMYYSCHCXKRNGLQHXXRRTGCRG 607
           +SRELR GIMY +C C KRNGLQ    R+ C+G
Sbjct: 14  RSRELRCGIMYTTCDCVKRNGLQDKCPRSACQG 46


>X67704-2|CAA47942.1|  265|Drosophila melanogaster sperm protein
           protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 135 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 242
           MC+PCGP  C   + C  P +C P+  +A +   L  C
Sbjct: 1   MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36


>AY118617-1|AAM49986.1|  265|Drosophila melanogaster LP10995p
           protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 135 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 242
           MC+PCGP  C   + C  P +C P+  +A +   L  C
Sbjct: 1   MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36


>AY060667-1|AAL28215.1|  334|Drosophila melanogaster GH09231p
           protein.
          Length = 334

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 135 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 242
           MC+PCGP  C   + C  P +C P+  +A +   L  C
Sbjct: 1   MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36



 Score = 29.5 bits (63), Expect = 3.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 138 CTPCGPMVCYKYEDCGPPLQCLP 206
           C PC P   Y+  +CGP   C P
Sbjct: 287 CGPCSPPCPYESPECGPCYPCAP 309


>AE014297-4222|AAF56780.1|  265|Drosophila melanogaster CG18396-PA
           protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 135 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 242
           MC+PCGP  C   + C  P +C P+  +A +   L  C
Sbjct: 1   MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36


>AE014297-4221|AAF56779.1|  334|Drosophila melanogaster CG11719-PA
           protein.
          Length = 334

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 135 MCTPCGPMVCYKYEDCGPPLQCLPR--SAFKRNGLQDC 242
           MC+PCGP  C   + C  P +C P+  +A +   L  C
Sbjct: 1   MCSPCGP--CSPCDPCCGPFECSPKCYNAAQLEALPQC 36



 Score = 29.5 bits (63), Expect = 3.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 138 CTPCGPMVCYKYEDCGPPLQCLP 206
           C PC P   Y+  +CGP   C P
Sbjct: 287 CGPCSPPCPYESPECGPCYPCAP 309


>X67704-1|CAA47941.1|  334|Drosophila melanogaster sperm protein
           protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 138 CTPCGPMVCYKYEDCGPPLQCLP 206
           C PC P   Y+  +CGP   C P
Sbjct: 287 CGPCSPPCPYESPECGPCYPCAP 309


>X98401-1|CAA67051.1|  398|Drosophila melanogaster phosphotyrosyl
           phosphatase activatorprotein.
          Length = 398

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 555 QWQL*YIIPPRNSRLLFSLTDFRFHPFFW 469
           Q Q  Y + P  S+ ++SL DF+F PF W
Sbjct: 183 QLQRTYNMEPAGSQGVWSLDDFQFVPFIW 211


>AY060614-1|AAL28162.1|  398|Drosophila melanogaster GH04025p
           protein.
          Length = 398

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 555 QWQL*YIIPPRNSRLLFSLTDFRFHPFFW 469
           Q Q  Y + P  S+ ++SL DF+F PF W
Sbjct: 183 QLQRTYNMEPAGSQGVWSLDDFQFVPFIW 211


>AY051503-1|AAK92927.1| 2028|Drosophila melanogaster GH15471p
           protein.
          Length = 2028

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 327 CDAPRPARHTSHD-SVTLI*CHNGSHLATLRF*KK-KSADGNSGGQEGGSK 473
           C AP  A     D S+T   C+     A+ RF ++ +  +GN GG+EGG+K
Sbjct: 318 CMAPSTATVEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNGGGEEGGAK 368


>AF454347-1|AAL87864.1|  617|Drosophila melanogaster unconventional
           myosin protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 327 CDAPRPARHTSHD-SVTLI*CHNGSHLATLRF*KK-KSADGNSGGQEGGSK 473
           C AP  A     D S+T   C+     A+ RF ++ +  +GN GG+EGG+K
Sbjct: 438 CMAPSTATVEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNGGGEEGGAK 488


>AE014297-2146|ABI31171.1| 2160|Drosophila melanogaster CG31045-PG,
           isoform G protein.
          Length = 2160

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 327 CDAPRPARHTSHD-SVTLI*CHNGSHLATLRF*KK-KSADGNSGGQEGGSK 473
           C AP  A     D S+T   C+     A+ RF ++ +  +GN GG+EGG+K
Sbjct: 438 CMAPSTATVEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNGGGEEGGAK 488


>AE014297-2145|AAN13695.2| 2194|Drosophila melanogaster CG31045-PB,
           isoform B protein.
          Length = 2194

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 327 CDAPRPARHTSHD-SVTLI*CHNGSHLATLRF*KK-KSADGNSGGQEGGSK 473
           C AP  A     D S+T   C+     A+ RF ++ +  +GN GG+EGG+K
Sbjct: 438 CMAPSTATVEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNGGGEEGGAK 488


>AE014297-2143|AAF55271.3| 2148|Drosophila melanogaster CG31045-PA,
           isoform A protein.
          Length = 2148

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 327 CDAPRPARHTSHD-SVTLI*CHNGSHLATLRF*KK-KSADGNSGGQEGGSK 473
           C AP  A     D S+T   C+     A+ RF ++ +  +GN GG+EGG+K
Sbjct: 438 CMAPSTATVEEIDHSITNGNCNTLRRSASKRFKRQSRHENGNGGGEEGGAK 488


>AE014134-597|AAF51115.1|  398|Drosophila melanogaster CG3289-PA
           protein.
          Length = 398

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 555 QWQL*YIIPPRNSRLLFSLTDFRFHPFFW 469
           Q Q  Y + P  S+ ++SL DF+F PF W
Sbjct: 183 QLQRTYNMEPAGSQGVWSLDDFQFVPFIW 211


>AY119029-1|AAM50889.1|  507|Drosophila melanogaster LP05465p
           protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 132 IMCTPCGPMVCYKYEDCGPPLQCLPRSAFKRNGLQD 239
           I C P  P VC K E C  P  C  ++ +KR    D
Sbjct: 122 IDCHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSD 157


>AE014134-2443|AAF53364.2|  620|Drosophila melanogaster CG8942-PA
           protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 132 IMCTPCGPMVCYKYEDCGPPLQCLPRSAFKRNGLQD 239
           I C P  P VC K E C  P  C  ++ +KR    D
Sbjct: 122 IDCHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSD 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,752,947
Number of Sequences: 53049
Number of extensions: 535965
Number of successful extensions: 1344
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)