Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30303.Seq
         (888 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023E163 Cluster: hypothetical protein FG03294.1; ...    34   5.6  
UniRef50_Q5B8F6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_Q4P378 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  

>UniRef50_UPI000023E163 Cluster: hypothetical protein FG03294.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG03294.1 - Gibberella zeae PH-1
          Length = 646

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
 Frame = +3

Query: 600 WLTWSPVSAARGTSTLPATRTALSAIRSEDFXIYWKCPFKSNNGADHP*VVLLLRHITVV 779
           +L W+ +SAAR  ST P      +   S      W+C     +G+D P  +L +    ++
Sbjct: 170 YLLWAFLSAARRYSTFPVAPLNCADDASAYAAKAWECIELPWSGSDSPEKILTVIQTIIL 229

Query: 780 SF*LDAPAADXKRXXWXRGSALXVSSSIK-NRVPDAS 887
               + PA    +     G A+ ++ + K N  PDAS
Sbjct: 230 IVSTEVPAGHCTQAHMKLGFAVRLAQNNKLNLEPDAS 266


>UniRef50_Q5B8F6 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 215

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
 Frame = -3

Query: 472 PARRSPINKKQLLAASKRSSLRQFSVPKRATPAGRSSSARNTLLATRRAEYKQRD*RKQY 293
           PA RS   K Q     K ++ +  S    A P  R  + R T  ATRRAE+   +  ++ 
Sbjct: 53  PATRS---KTQARTTKKTTTKKATSTTSTAKPQTRKGARRGTRSATRRAEHNATEEVQES 109

Query: 292 NVQAVSELGHSDTPNHLVHGAGDRQAM*TFFVQALLNP-NSDR 167
             +   +   +D   ++    GD ++       AL+ P NS+R
Sbjct: 110 VEKNTHDTVRTDNKENVDVNTGDLESRPLASDSALMEPKNSER 152


>UniRef50_Q4P378 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 345

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 166 SCRCLD*VALARRRSTLLVDLLLRAPSDWVYQNGQVHSQL 285
           SC CL  +AL RR+  L++ LLL A    +  NGQV S L
Sbjct: 26  SCACLPPLALLRRKKLLVLVLLLPAIYFMLIYNGQVSSPL 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,018,763
Number of Sequences: 1657284
Number of extensions: 16584127
Number of successful extensions: 40935
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40925
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)