Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30303.Seq
         (888 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    27   0.76 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   7.1  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   9.4  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    23   9.4  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 27.1 bits (57), Expect = 0.76
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 597 CWLTWSPVSAARGTSTLPATRTAL 668
           CWL ++ +   RGT  LPA  TAL
Sbjct: 501 CWLPFNFLMVRRGTVPLPARITAL 524


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 529 RNKFVGDGQSHHTRDHSTSGDVTAGLLGVLSRLHEARVHYL 651
           R +F G G SHH  + +T  D   GL+   +R   AR+ Y+
Sbjct: 521 RKRFAGGGHSHHRSNDTT--DALCGLIFCNNRA-MARILYV 558


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 603 LTWSPVSAARGTSTLP 650
           L WSP +A R  S+LP
Sbjct: 161 LGWSPAAAVRSDSSLP 176


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 144 VRLVVTVLLSLFGLSSACTKKVYIACRSPAPC 239
           +R V+TVLL LF L      K   +  S  PC
Sbjct: 1   MRYVITVLLLLFTLCPFALAKRSFSLLSSDPC 32


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 452 YW*SACWKSSDAGANVS 502
           +W   CWK SD   N++
Sbjct: 127 FWLHKCWKQSDPKVNMA 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 887,316
Number of Sequences: 2352
Number of extensions: 18146
Number of successful extensions: 47
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)