Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30302.Seq
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    25   1.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   9.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.8  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   9.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   9.8  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   9.8  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -2

Query: 428 GNSLIRGIGCGTELQSEVVVSVNDLDIVSGHDESKV*WEVLSN 300
           GN+++ GI   ++L++ ++ S        G+D   + WE  +N
Sbjct: 108 GNAILNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEYPAN 150


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 256  WSTATSCGSATDRKLLESTSH*TLDSSWP 342
            W+T T+  + T R    ST+     ++WP
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 13  APNKMKLLVVFAMCMLAASA 72
           APN  +  VV+A C L A+A
Sbjct: 123 APNGHQTQVVYASCKLQAAA 142


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 482 GNELPTDEFSMLVYTIAVGNSLIRGI 405
           GNE PTD+     Y +   N  +R I
Sbjct: 368 GNEEPTDKNKDKFYLLETDNFFLREI 393


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 482 GNELPTDEFSMLVYTIAVGNSLIRGI 405
           GNE PTD+     Y +   N  +R I
Sbjct: 368 GNEEPTDKNKDKFYLLETDNFFLREI 393


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 482 GNELPTDEFSMLVYTIAVGNSLIRGI 405
           GNE PTD+     Y +   N  +R I
Sbjct: 368 GNEEPTDKNKDKFYLLETDNFFLREI 393


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 482 GNELPTDEFSMLVYTIAVGNSLIRGI 405
           GNE PTD+     Y +   N  +R I
Sbjct: 368 GNEEPTDKNKDKFYLLETDNFFLREI 393


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 482 GNELPTDEFSMLVYTIAVGNSLIRGI 405
           GNE PTD+     Y +   N  +R I
Sbjct: 367 GNEEPTDKNKDKFYLLETDNFFLREI 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,147
Number of Sequences: 336
Number of extensions: 3928
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)