Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30300.Seq
         (523 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   4.4  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   4.4  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   4.4  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   4.4  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   4.4  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   4.4  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   4.4  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   4.4  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   4.4  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   7.7  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   7.7  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   7.7  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSLYIN 197
           +N+Y + Y  NY  L Y   IN
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIIN 115


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSLYIN 197
           +N+Y + Y  NY  L Y   IN
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIIN 115


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSLYIN 197
           +N+Y + Y  NY  L Y   IN
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIIN 115


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSLYIN 197
           +N+Y + Y  NY  L Y   IN
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIIN 115


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSLYIN 197
           +N+Y + Y  NY  L Y   IN
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIIN 115


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSLYIN 197
           +N+Y + Y  NY  L Y   IN
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIIN 115


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSLYIN 197
           +N+Y + Y  NY  L Y   IN
Sbjct: 98  YNNYNNNYNTNYKKLQYYNIIN 119


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSLYIN 197
           +N+Y + Y  NY  L Y   IN
Sbjct: 94  YNNYNNNYNTNYKKLQYYNIIN 115


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 132 FNHYTSFY*ANYLSLHYSL-YINK 200
           +N+Y + Y  NY  L+Y++ YI +
Sbjct: 337 YNNYNNNYNNNYKKLYYNINYIEQ 360


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 135 NHYTSFY*ANYLSLHYSL-YINK 200
           N+Y   Y  NY  L+Y++ YI +
Sbjct: 94  NNYKKLYCNNYKKLYYNINYIEQ 116


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 135 NHYTSFY*ANYLSLHYSL-YINK 200
           N+Y   Y  NY  L+Y++ YI +
Sbjct: 94  NNYKKLYCNNYKKLYYNINYIEQ 116


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 135 NHYTSFY*ANYLSLHYSL-YINK 200
           N+Y   Y  NY  L+Y++ YI +
Sbjct: 94  NNYKKLYCNNYRKLYYNINYIEQ 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,809
Number of Sequences: 438
Number of extensions: 1467
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)