Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30298.Seq
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    26   0.42 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    26   0.42 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    26   0.42 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    26   0.42 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    26   0.42 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   3.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.2  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 733 RDEGPSXTEKWLCLWKPSSQQCCXEVNWYTLSTQ 632
           R E P   E W  +WKP +   C +   + L  Q
Sbjct: 56  RFEAPKPVEPWHGVWKPDASYKCMQYIQHPLPGQ 89


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 733 RDEGPSXTEKWLCLWKPSSQQCCXEVNWYTLSTQ 632
           R E P   E W  +WKP +   C +   + L  Q
Sbjct: 56  RFEAPKPVEPWHGVWKPDASYKCMQYIQHPLPGQ 89


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 733 RDEGPSXTEKWLCLWKPSSQQCCXEVNWYTLSTQ 632
           R E P   E W  +WKP +   C +   + L  Q
Sbjct: 56  RFEAPKPVEPWHGVWKPDASYKCMQYIQHPLPGQ 89


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 733 RDEGPSXTEKWLCLWKPSSQQCCXEVNWYTLSTQ 632
           R E P   E W  +WKP +   C +   + L  Q
Sbjct: 56  RFEAPKPVEPWHGVWKPDASYKCMQYIQHPLPGQ 89


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 733 RDEGPSXTEKWLCLWKPSSQQCCXEVNWYTLSTQ 632
           R E P   E W  +WKP +   C +   + L  Q
Sbjct: 56  RFEAPKPVEPWHGVWKPDASYKCMQYIQHPLPGQ 89


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 165 KTVRSCLLYQSQCSSIVRGERLFALGDYRLAKEAFFCHQEEEGNLQ 302
           K V  C L +S   + + G R  ALG    AK      +E + ++Q
Sbjct: 496 KVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQLHMQ 541


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 165 KTVRSCLLYQSQCSSIVRGERLFALGDYRLAKEAFFCHQEEEGNLQ 302
           K V  C L +S   + + G R  ALG    AK      +E + ++Q
Sbjct: 388 KVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQLHMQ 433


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 210 IVRGERLFALGDYRLAKEAFFCHQEEE 290
           +V+ ERL +LG    A E  +C Q EE
Sbjct: 562 LVQRERLISLGINSDALEPEWCWQNEE 588


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = -2

Query: 658 VNWYTLSTQLGEIXVCILTHGHSLSWGIPKQ 566
           VNW       G++ + +  +GH+     P Q
Sbjct: 241 VNWVNAGADPGKLTIGLAFYGHTFQLADPAQ 271


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 386 TTTFPGKPNWHLSSESVVSTKFHRSPXF 469
           TT F  KP+   +++ VV TK  ++P F
Sbjct: 174 TTKFTTKPSTKPTNKPVVVTKPPQAPPF 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,139
Number of Sequences: 336
Number of extensions: 3063
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)