Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30298.Seq
(830 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 146 3e-35
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 146 3e-35
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 146 3e-35
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 56 6e-08
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 49 7e-06
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 47 3e-05
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 47 3e-05
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 47 3e-05
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 47 3e-05
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 146 bits (354), Expect = 3e-35
Identities = 71/123 (57%), Positives = 88/123 (71%)
Frame = +1
Query: 256 LKRRSSAIKKKREIFKRAEQYVKEYRIKERDXIRLXRQARNRGNYYVPGEAKLAFVIRIR 435
LK+ + +K+E RAE+Y EY E+ I+L R A+ R +YVP EAKLAFV+RIR
Sbjct: 27 LKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIR 86
Query: 436 GINQVSPKSXXFXQXFRLXQIX*WLFVRLNKATVNMLRIAXXYIAWGYPNLKSVREXVYK 615
GIN+V+PK Q FRL QI +F++LNKAT+NMLRIA YI WGYPNLKSVRE +YK
Sbjct: 87 GINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYK 146
Query: 616 RGF 624
RGF
Sbjct: 147 RGF 149
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 146 bits (354), Expect = 3e-35
Identities = 71/123 (57%), Positives = 88/123 (71%)
Frame = +1
Query: 256 LKRRSSAIKKKREIFKRAEQYVKEYRIKERDXIRLXRQARNRGNYYVPGEAKLAFVIRIR 435
LK+ + +K+E RAE+Y EY E+ I+L R A+ R +YVP EAKLAFV+RIR
Sbjct: 40 LKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIR 99
Query: 436 GINQVSPKSXXFXQXFRLXQIX*WLFVRLNKATVNMLRIAXXYIAWGYPNLKSVREXVYK 615
GIN+V+PK Q FRL QI +F++LNKAT+NMLRIA YI WGYPNLKSVRE +YK
Sbjct: 100 GINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYK 159
Query: 616 RGF 624
RGF
Sbjct: 160 RGF 162
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2
Query: 149 PVKGKEDSKKLPAVPESVLK 208
PV K +KKLPAVPES LK
Sbjct: 4 PVVKKPAAKKLPAVPESKLK 23
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 146 bits (354), Expect = 3e-35
Identities = 71/123 (57%), Positives = 88/123 (71%)
Frame = +1
Query: 256 LKRRSSAIKKKREIFKRAEQYVKEYRIKERDXIRLXRQARNRGNYYVPGEAKLAFVIRIR 435
LK+ + +K+E RAE+Y EY E+ I+L R A+ R +YVP EAKLAFV+RIR
Sbjct: 40 LKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIR 99
Query: 436 GINQVSPKSXXFXQXFRLXQIX*WLFVRLNKATVNMLRIAXXYIAWGYPNLKSVREXVYK 615
GIN+V+PK Q FRL QI +F++LNKAT+NMLRIA YI WGYPNLKSVRE +YK
Sbjct: 100 GINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYK 159
Query: 616 RGF 624
RGF
Sbjct: 160 RGF 162
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2
Query: 149 PVKGKEDSKKLPAVPESVLK 208
PV K +KKLPAVPES LK
Sbjct: 4 PVVKKPAAKKLPAVPESKLK 23
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 56.0 bits (129), Expect = 6e-08
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = -3
Query: 630 LAKSXFVYXLTDTL*VGVSPSNVXXGDT*HIHSSLIQTYKQPLXYLXQSKXLXKXXGLR* 451
L +S V L L +G++P +V GD H+ L+Q + + L Q++ L L
Sbjct: 33 LHESTLVDQLPHGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLGS 92
Query: 450 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDXITF-LDAVFLDVL 313
+LVDT D+DDK QFG G+V + + + D F LD + L +L
Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLL 139
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 49.2 bits (112), Expect = 7e-06
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Frame = +1
Query: 256 LKRRSSAIKKKREIFKRAEQYVKEYRIKERDXIRLXRQARNRGNYYVPGEA------KLA 417
+K+R++ K F+RAE +V Y ER R+ + +A KL
Sbjct: 41 IKKRTAT--KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLL 98
Query: 418 FVIRIRGINQVSPKSXXFXQXFRLXQIX*WLFVRLNKATVNMLRIAXXYIAWGYPNLKSV 597
FV+R+ G + + R+ +F+ K +LR+ ++ +G P+L S+
Sbjct: 99 FVMRLAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSI 158
Query: 598 REXVYKRGFRQAEWTTYTNSLPNSIVEKK 684
RE V+K+GF + + T N++VE++
Sbjct: 159 RELVFKKGFARIDGKK-TAIQSNTMVEQQ 186
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 47.2 bits (107), Expect = 3e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +1
Query: 256 LKRRSSAIKKKREIFKRAEQYVKEYRIKERDXIRLXRQARNRGNYYVPGEA------KLA 417
+K+R++ K F+RAE +V Y ER R+ + +A KL
Sbjct: 41 IKKRTAT--KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLL 98
Query: 418 FVIRIRGINQVSPKSXXFXQXFRLXQIX*WLFVRLNKATVNMLRIAXXYIAWGYPNLKSV 597
FV+R G + + R+ +F+ K +LR+ ++ +G P+L S+
Sbjct: 99 FVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSI 158
Query: 598 REXVYKRGFRQAEWTTYTNSLPNSIVEKK 684
RE V+K+GF + + T N++VE++
Sbjct: 159 RELVFKKGFARIDGKK-TAIQSNTMVEQQ 186
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 47.2 bits (107), Expect = 3e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +1
Query: 256 LKRRSSAIKKKREIFKRAEQYVKEYRIKERDXIRLXRQARNRGNYYVPGEA------KLA 417
+K+R++ K F+RAE +V Y ER R+ + +A KL
Sbjct: 41 IKKRTAT--KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLL 98
Query: 418 FVIRIRGINQVSPKSXXFXQXFRLXQIX*WLFVRLNKATVNMLRIAXXYIAWGYPNLKSV 597
FV+R G + + R+ +F+ K +LR+ ++ +G P+L S+
Sbjct: 99 FVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSI 158
Query: 598 REXVYKRGFRQAEWTTYTNSLPNSIVEKK 684
RE V+K+GF + + T N++VE++
Sbjct: 159 RELVFKKGFARIDGKK-TAIQSNTMVEQQ 186
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 47.2 bits (107), Expect = 3e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +1
Query: 256 LKRRSSAIKKKREIFKRAEQYVKEYRIKERDXIRLXRQARNRGNYYVPGEA------KLA 417
+K+R++ K F+RAE +V Y ER R+ + +A KL
Sbjct: 41 IKKRTAT--KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLL 98
Query: 418 FVIRIRGINQVSPKSXXFXQXFRLXQIX*WLFVRLNKATVNMLRIAXXYIAWGYPNLKSV 597
FV+R G + + R+ +F+ K +LR+ ++ +G P+L S+
Sbjct: 99 FVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSI 158
Query: 598 REXVYKRGFRQAEWTTYTNSLPNSIVEKK 684
RE V+K+GF + + T N++VE++
Sbjct: 159 RELVFKKGFARIDGKK-TAIQSNTMVEQQ 186
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 47.2 bits (107), Expect = 3e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +1
Query: 256 LKRRSSAIKKKREIFKRAEQYVKEYRIKERDXIRLXRQARNRGNYYVPGEA------KLA 417
+K+R++ K F+RAE +V Y ER R+ + +A KL
Sbjct: 41 IKKRTAT--KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLL 98
Query: 418 FVIRIRGINQVSPKSXXFXQXFRLXQIX*WLFVRLNKATVNMLRIAXXYIAWGYPNLKSV 597
FV+R G + + R+ +F+ K +LR+ ++ +G P+L S+
Sbjct: 99 FVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSI 158
Query: 598 REXVYKRGFRQAEWTTYTNSLPNSIVEKK 684
RE V+K+GF + + T N++VE++
Sbjct: 159 RELVFKKGFARIDGKK-TAIQSNTMVEQQ 186
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,974,123
Number of Sequences: 53049
Number of extensions: 540069
Number of successful extensions: 1014
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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