Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30294.Seq
         (403 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    23   4.2  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   5.5  
DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    23   5.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.5  
AY062192-1|AAL58553.1|  151|Anopheles gambiae cytochrome P450 CY...    22   9.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   9.6  

>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 119 DREKPKRSTKSNERRRSPREVLSFS 193
           +R  P+R +  N +RR P + + FS
Sbjct: 109 ERFDPERFSDGNTQRRGPYDYIPFS 133


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 329 LALERXKLRADREKIEREKNELLRL 403
           LALE  KLR   E+  +   EL+RL
Sbjct: 334 LALETEKLRRTVEQTGKSSAELVRL 358


>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 102 KSLIALIGKSLKGALKVMSEDDPLEKC 182
           KS+ AL+  +L  A+ VM +DDP  KC
Sbjct: 2   KSVQALLLLTLL-AVAVMGDDDPDTKC 27


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 332 ALERXKLRADREKIEREKNE 391
           A+ER K R  RE+ ERE+ E
Sbjct: 465 AIEREKERELREQREREQRE 484


>AY062192-1|AAL58553.1|  151|Anopheles gambiae cytochrome P450
           CYP4H17 protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 PKRSTKSNERRRSPREVLSFS 193
           P+R + +NE +R P + + FS
Sbjct: 122 PERFSDANEIKRGPYDYIPFS 142


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 320 KHRLALERXKLRADREKIEREKNE 391
           K   A +R ++  D+EKIE  K E
Sbjct: 863 KQAEARQRQEIEKDKEKIELMKQE 886


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,644
Number of Sequences: 2352
Number of extensions: 1859
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)