Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30294.Seq
         (403 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D50928-1|BAA09487.2|  962|Homo sapiens KIAA0138 protein.               38   0.017
AC004611-1|AAC14666.1|  953|Homo sapiens KIAA0138 protein.             38   0.017
BC014944-1|AAH14944.1|  672|Homo sapiens SLTM protein protein.         34   0.15 
BC046119-1|AAH46119.3|  502|Homo sapiens SLTM protein protein.         32   0.62 
AK023275-1|BAB14502.1|  478|Homo sapiens protein ( Homo sapiens ...    32   0.62 

>D50928-1|BAA09487.2|  962|Homo sapiens KIAA0138 protein.
          Length = 962

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
 Frame = +2

Query: 134 KRSTKSNERR---RSPREVLSFSKIWKXRXVXRXREXSRXAREGSAAVAPPRKPCGXXXX 304
           +RS+KS +R+   +  R++LSF KI + R   R R+  R  RE        ++       
Sbjct: 602 ERSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLE 661

Query: 305 XXXXXKHRLALERXKL-------RADREKIEREKNELLRL 403
                K +  L+R +L       R +RE++ERE+ E  R+
Sbjct: 662 AFHERKEKARLQRERLQLECQRQRLERERMERERLERERM 701


>AC004611-1|AAC14666.1|  953|Homo sapiens KIAA0138 protein.
          Length = 953

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
 Frame = +2

Query: 134 KRSTKSNERR---RSPREVLSFSKIWKXRXVXRXREXSRXAREGSAAVAPPRKPCGXXXX 304
           +RS+KS +R+   +  R++LSF KI + R   R R+  R  RE        ++       
Sbjct: 593 ERSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLE 652

Query: 305 XXXXXKHRLALERXKL-------RADREKIEREKNELLRL 403
                K +  L+R +L       R +RE++ERE+ E  R+
Sbjct: 653 AFHERKEKARLQRERLQLECQRQRLERERMERERLERERM 692


>BC014944-1|AAH14944.1|  672|Homo sapiens SLTM protein protein.
          Length = 672

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
 Frame = +2

Query: 110 HRSDREKPKRST-KSNERRRSPREVLSFSKIWKXRX------VXRXREXSRXAREGSAAV 268
           H   +EK + S  K  ++    +E+LSF K+ + R         R R      R    A 
Sbjct: 218 HGRSKEKERASLDKKRDKDYRRKEILSFEKMKEQRLREHLVRFERLRRAMELRRRREIAE 277

Query: 269 APPRKPCGXXXXXXXXXKHRLALERXKLRADREKIEREKNELLRL 403
              R+            + RL  ER +L  +R+K+ERE+ E  RL
Sbjct: 278 RERRERERIRIIREREERERLQRERERLEIERQKLERERMERERL 322


>BC046119-1|AAH46119.3|  502|Homo sapiens SLTM protein protein.
          Length = 502

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
 Frame = +2

Query: 110 HRSDREKPKRST-KSNERRRSPREVLSFSKIWKXRX------VXRXREXSRXAREGSAAV 268
           H   +EK + S  K  ++    +E+L F K+ + R         R R      R    A 
Sbjct: 48  HGRSKEKERASLDKKRDKDYRRKEILPFEKMKEQRLREHLVRFERLRRAMELRRRREIAE 107

Query: 269 APPRKPCGXXXXXXXXXKHRLALERXKLRADREKIEREKNELLRL 403
              R+            + RL  ER +L  +R+K+ERE+ E  RL
Sbjct: 108 RERRERERIRIIREREERERLQRERERLEIERQKLERERMERERL 152


>AK023275-1|BAB14502.1|  478|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13213 fis, clone NT2RP4001126, weakly similar to
           TRICHOHYALIN. ).
          Length = 478

 Score = 32.3 bits (70), Expect = 0.62
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
 Frame = +2

Query: 110 HRSDREKPKRST-KSNERRRSPREVLSFSKIWKXRX------VXRXREXSRXAREGSAAV 268
           H   +EK + S  K  ++    +E+L F K+ + R         R R      R    A 
Sbjct: 24  HGRSKEKERASLDKKRDKDYRRKEILPFEKMKEQRLREHLVRFERLRRAMELRRRREIAE 83

Query: 269 APPRKPCGXXXXXXXXXKHRLALERXKLRADREKIEREKNELLRL 403
              R+            + RL  ER +L  +R+K+ERE+ E  RL
Sbjct: 84  RERRERERIRIIREREERERLQRERERLEIERQKLERERMERERL 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,297,283
Number of Sequences: 237096
Number of extensions: 276345
Number of successful extensions: 964
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)