Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30293.Seq
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    29   0.21 
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    27   0.83 
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    26   1.1  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    26   1.1  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    25   1.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   3.4  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   5.9  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    24   5.9  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 472 FGSTFGDLDGGVHFHQSIQEFPGH 401
           FG+  G +DGG++   S++ FPG+
Sbjct: 160 FGAMKGAVDGGLNIPHSVKRFPGY 183


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 473 IRKLFNLSKEDDYVVMSSKRVLPKPXKGKKMLNPXIRAPKNP 598
           +R+L         V ++ +R+LPKP +G++  N   R P++P
Sbjct: 78  VRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKR-PRSP 118


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 70  YPATGMPEVVRSGGRAQASYLLRK 141
           YPA+G P+VVR   R +  Y + +
Sbjct: 230 YPASGPPDVVRKDRRGELFYYMHQ 253


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -2

Query: 434 FPSVNPGISWAPLRTITRAKTERLASTIHPR 342
           +P +  G + APLR+I   + +++A+++HPR
Sbjct: 408 WPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 24/82 (29%), Positives = 34/82 (41%)
 Frame = +1

Query: 70  YPATGMPEVVRSGGRAQASYLLRKXHGRRSRX*SVXR*MEGLXTSCRWRQRQXRIPXETX 249
           YPATG   VVR   R +  Y +   H +     ++ R   GL  +  + Q +  IP E  
Sbjct: 216 YPATGPDRVVRKDRRGELFYHM---HQQTIARYNIERFANGLARTLSFSQLRESIP-EAY 271

Query: 250 RPTNSRVRLLMSKGHSCYRPRR 315
            P    VR    +  SC  P +
Sbjct: 272 FP--KIVRSSDGRAFSCRYPNQ 291


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 376 RPRDWRQQYIHELIYVFSLHRGAVCNMSGPLTSEDEHGCLS 254
           +P+D+R+  +  L  VF   +GA+ ++    T ED  G  S
Sbjct: 856 KPKDFRKHSLLPLNNVFDRIKGALPHLKKSPTKEDATGGFS 896


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 381 SCYCAQGCPGN 413
           +CYC   CPGN
Sbjct: 73  TCYCEGHCPGN 83


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 103 FEQLLACPLPGTKRLTS*LRSI 38
           F QL ACP   +K++ +  RS+
Sbjct: 213 FRQLQACPKDSSKKIVNNFRSV 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,345
Number of Sequences: 2352
Number of extensions: 13194
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)