Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30292.Seq
(476 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10137| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_15291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_9103| Best HMM Match : Herpes_UL31 (HMM E-Value=4) 28 3.4
SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0) 28 4.5
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 28 4.5
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 27 6.0
SB_26839| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 27 7.9
SB_41496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_30037| Best HMM Match : ANATO (HMM E-Value=0.035) 27 7.9
SB_20347| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-20) 27 7.9
>SB_10137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 99.5 bits (237), Expect = 1e-21
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +3
Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
P K +VHNVKELE+LMM NR Y AEIAH VSS+KRK IVERAQQLSI+VTN+ ARLR
Sbjct: 69 PDGFKKFVVHNVKELEVLMMMNRSYAAEIAHNVSSRKRKAIVERAQQLSIKVTNSNARLR 128
Query: 420 SQENE 434
S+ENE
Sbjct: 129 SEENE 133
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = +2
Query: 41 IRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
+ PV RP I+KKR K+FIRHQSDRY ++ +WRKP+GIDNRVR
Sbjct: 2 VMPVNRPRILKKRQKKFIRHQSDRYMRVGESWRKPKGIDNRVR 44
Score = 59.3 bits (137), Expect = 2e-09
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
+RFKGQYLMPNIGYGSNKKTR ++P+GF++
Sbjct: 45 RRFKGQYLMPNIGYGSNKKTRFLMPDGFKK 74
>SB_15291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +3
Query: 234 YAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 413
Y PK K V K ++++ N YCA A SKK +L E+ ++L R + A
Sbjct: 64 YEPKVSAKQRVEEFKGEDLIVRNNEVYCA--ACKEVSKKHELNKEKLKKLGKREEDIAQA 121
Query: 414 LRSQE 428
L +
Sbjct: 122 LHKYD 126
>SB_9103| Best HMM Match : Herpes_UL31 (HMM E-Value=4)
Length = 551
Score = 28.3 bits (60), Expect = 3.4
Identities = 27/118 (22%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Frame = +3
Query: 54 TGRQSSKRGRRDLSGINRIAMTNLRGIGVNLEVLTTESAAVQGS-ILDA---QHWLRFQQ 221
+GRQ KR R ++ + + I NL+ L + A+QG+ D+ Q L +
Sbjct: 78 SGRQGMKRMRPKVTLHDFFKRSKTENIEKNLQFLARQGIAIQGAKETDSNFHQCLLLRAK 137
Query: 222 EDPS---YAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLS 386
+DPS + K K H+V+ E+L + +++ ++A+ + ++ L+ + ++
Sbjct: 138 DDPSILQWMSKKTDKYTSHDVQN-ELLDIMSQQVIRDVANRIKTECYSLLADECTDVA 194
>SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 839
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 207 LRFQQEDPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHG-VSSKKRKLI 362
L+ Q+ PS P+ +++V ++E E+ RK+C EIA+ V S R+++
Sbjct: 272 LKCQKYWPSANPEEYGRLVVTPLEEEELSHYVIRKFCIEIANSDVESPAREIV 324
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 392 SDAELLGSFHDQLPLLRRDTMSDLCAVLPVLHH 294
S+ E GSF D++ RRDT S +C +L H
Sbjct: 300 SETERGGSFLDEVASPRRDTASPVCLWGAILFH 332
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +3
Query: 144 LEVLTTESAAVQGSILDAQHWLRFQQEDPSYAPKWIPKVLVHNVKELEILMMQNRK 311
+E L E+ ++G++ + +++Q+E PK K + ++ELE ++ K
Sbjct: 586 IEALRHENKVLKGTLEITEGEVKYQREHTGRTPKGKRKEIWREIRELETILKDVHK 641
>SB_26839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 71 KKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRSGSR 181
K K+F++H+ D +L RN WR G N GSR
Sbjct: 50 KGEWKQFVKHKVDEILQLTRNGEWRHCSGEQNPADIGSR 88
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 419 AEASGRIRHSDAELLGSFHDQLPLLRRDTMSDLCAVLPVLHHQD 288
AEA+ R +ELL S ++LP +RR + + H D
Sbjct: 247 AEATNDFRQELSELLASARERLPFMRRSLLEIEATAQEIPTHVD 290
>SB_41496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 71 KKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRSGSR 181
K K+F++H+ D +L RN WR G N GSR
Sbjct: 50 KGEWKQFVKHKVDEILQLTRNGEWRHCSGEQNPADIGSR 88
>SB_30037| Best HMM Match : ANATO (HMM E-Value=0.035)
Length = 124
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 360 SASASSKRHHERSLRSTSCFASSRFPAL*HCEL 262
S + +R +RS + ++C AS R P+ CEL
Sbjct: 21 STEHAYQRRTKRSSKESACCASGRMPSRARCEL 53
>SB_20347| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-20)
Length = 1074
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 71 KKRTKRFIRHQSDRYDKLKRN--WRKPRGIDNRVRSGSR 181
K K+F++H+ D +L RN WR G N GSR
Sbjct: 456 KGEWKQFVKHRVDEILQLTRNGEWRHCSGEQNPADIGSR 494
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,769,893
Number of Sequences: 59808
Number of extensions: 269630
Number of successful extensions: 938
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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