Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30292.Seq
         (476 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   101   7e-22
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   101   7e-22
BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   101   7e-22
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   101   7e-22
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   101   7e-22
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   101   7e-22
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   101   7e-22
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...    80   2e-15
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    33   0.20 
AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro...    27   9.9  
AY069273-1|AAL39418.1|  421|Drosophila melanogaster GM10003p pro...    27   9.9  
AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ...    27   9.9  
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,...    27   9.9  
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,...    27   9.9  
AE013599-3899|ABI31114.1|  156|Drosophila melanogaster CG13586-P...    27   9.9  
AE013599-3898|AAF47226.2|  156|Drosophila melanogaster CG13586-P...    27   9.9  

>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  101 bits (241), Expect = 7e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
           P    K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 420 SQENE 434
           SQENE
Sbjct: 130 SQENE 134



 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 36/45 (80%), Positives = 37/45 (82%)
 Frame = +2

Query: 35  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVR
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVR 45



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RFKGQYLMPNIGYGSNK+TRHMLP GF++
Sbjct: 46  RRFKGQYLMPNIGYGSNKRTRHMLPTGFKK 75


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  101 bits (241), Expect = 7e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
           P    K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 420 SQENE 434
           SQENE
Sbjct: 130 SQENE 134



 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 36/45 (80%), Positives = 37/45 (82%)
 Frame = +2

Query: 35  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVR
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVR 45



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RFKGQYLMPNIGYGSNK+TRHMLP GF++
Sbjct: 46  RRFKGQYLMPNIGYGSNKRTRHMLPTGFKK 75


>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  101 bits (241), Expect = 7e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
           P    K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 83  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 142

Query: 420 SQENE 434
           SQENE
Sbjct: 143 SQENE 147



 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 37/47 (78%), Positives = 39/47 (82%)
 Frame = +2

Query: 29  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVR
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVR 58



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RFKGQYLMPNIGYGSNK+TRHMLP GF++
Sbjct: 59  RRFKGQYLMPNIGYGSNKRTRHMLPTGFKK 88


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  101 bits (241), Expect = 7e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
           P    K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 420 SQENE 434
           SQENE
Sbjct: 130 SQENE 134



 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 36/45 (80%), Positives = 37/45 (82%)
 Frame = +2

Query: 35  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVR
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVR 45



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RFKGQYLMPNIGYGSNK+TRHMLP GF++
Sbjct: 46  RRFKGQYLMPNIGYGSNKRTRHMLPTGFKK 75


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  101 bits (241), Expect = 7e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
           P    K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 420 SQENE 434
           SQENE
Sbjct: 130 SQENE 134



 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 36/45 (80%), Positives = 37/45 (82%)
 Frame = +2

Query: 35  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVR
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVR 45



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RFKGQYLMPNIGYGSNK+TRHMLP GF++
Sbjct: 46  RRFKGQYLMPNIGYGSNKRTRHMLPTGFKK 75


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  101 bits (241), Expect = 7e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
           P    K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 129

Query: 420 SQENE 434
           SQENE
Sbjct: 130 SQENE 134



 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 36/45 (80%), Positives = 37/45 (82%)
 Frame = +2

Query: 35  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVR
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVR 45



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RFKGQYLMPNIGYGSNK+TRHMLP GF++
Sbjct: 46  RRFKGQYLMPNIGYGSNKRTRHMLPTGFKK 75


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  101 bits (241), Expect = 7e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
           P    K LVHNV+ELE+L+MQNR YC EIAHGVSSKKRK IVERA+QLS+R+TN   RLR
Sbjct: 83  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLR 142

Query: 420 SQENE 434
           SQENE
Sbjct: 143 SQENE 147



 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 37/47 (78%), Positives = 39/47 (82%)
 Frame = +2

Query: 29  YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVR
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVR 58



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RFKGQYLMPNIGYGSNK+TRHMLP GF++
Sbjct: 59  RRFKGQYLMPNIGYGSNKRTRHMLPTGFKK 88


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 35/44 (79%), Positives = 36/44 (81%)
 Frame = +2

Query: 35  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRV 166
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRV
Sbjct: 1   MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRV 44



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
           +RFKGQYLMPNIGYGSNK+TRHMLP GF++
Sbjct: 46  RRFKGQYLMPNIGYGSNKRTRHMLPTGFKK 75



 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = +3

Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 392
           P    K LVHNV+ELE+L+MQN +   E+    S  + K I+ERA+QLS+R
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLR 119


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 22/63 (34%), Positives = 31/63 (49%)
 Frame = +2

Query: 254 EGPSSQC*RAGNLDDAKQEVLRRDRSWCLFEEAEADRGKSPAAQHQSDECGRSPPLPGE* 433
           E P +Q  RAG    A+  +LRRDR   L +EA+ D     AA     +  RSP    E 
Sbjct: 42  EVPGAQRARAGGPAHAEPRLLRRDRPRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRER 101

Query: 434 INI 442
           +++
Sbjct: 102 VSL 104



 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 165 SAAVQGSILDAQHWLRFQQEDPSYAPKWIPKV 260
           ++ +QG++ DAQH LR +Q  P +A   I +V
Sbjct: 12  ASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEV 43


>AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p
           protein.
          Length = 1019

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 26  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 139
           T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 841 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 878


>AY069273-1|AAL39418.1|  421|Drosophila melanogaster GM10003p
           protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 26  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 139
           T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 243 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 280


>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
            protein.
          Length = 2422

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 26   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 139
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2244 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2281


>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
            isoform D protein.
          Length = 2431

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 26   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 139
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2253 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2290


>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
            isoform C protein.
          Length = 2410

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 26   TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 139
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2232 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2269


>AE013599-3899|ABI31114.1|  156|Drosophila melanogaster CG13586-PB,
           isoform B protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 204 WLRFQQEDPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKR 353
           W+    E P+  PK  PK+   N+K   +L +      A + H  +  KR
Sbjct: 20  WVAQSTESPAPTPKQAPKMCSRNIKISVVLFLVLIPIFAALPHNHNLSKR 69


>AE013599-3898|AAF47226.2|  156|Drosophila melanogaster CG13586-PA,
           isoform A protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 204 WLRFQQEDPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKR 353
           W+    E P+  PK  PK+   N+K   +L +      A + H  +  KR
Sbjct: 20  WVAQSTESPAPTPKQAPKMCSRNIKISVVLFLVLIPIFAALPHNHNLSKR 69


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,180,246
Number of Sequences: 53049
Number of extensions: 406088
Number of successful extensions: 1287
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)