Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30292.Seq
(476 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 110 9e-27
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 2.9
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 3.9
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 22 3.9
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 21 5.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.1
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 9.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.0
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 110 bits (264), Expect = 9e-27
Identities = 55/65 (84%), Positives = 58/65 (89%)
Frame = +3
Query: 240 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 419
P KVLVHNVKELE+LMMQNRK+CAEIAHG SSKKRK IVERAQQLSIRVT A+ARLR
Sbjct: 70 PTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIRVTYASARLR 129
Query: 420 SQENE 434
SQENE
Sbjct: 130 SQENE 134
Score = 96.3 bits (229), Expect = 1e-22
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +2
Query: 35 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 169
MAIRPVYRPTIVKKRTK+FIRHQSDRY KLKRNWRKP+GIDNRVR
Sbjct: 1 MAIRPVYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKPKGIDNRVR 45
Score = 65.7 bits (153), Expect = 2e-13
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 169 QRFKGQYLMPNIGYGSNKKTRHMLPNGFRR 258
+RFKGQYLMPNIGYGSNKKTRHMLP GFR+
Sbjct: 46 RRFKGQYLMPNIGYGSNKKTRHMLPTGFRK 75
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 2.9
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 141 NLEVLTTESAAVQGSILDAQHWLRFQQEDPSYAPKWIPKV 260
NL V +S A+ L LR+ QE AP WI V
Sbjct: 305 NLMVFYEKSLALAAFSLMLTSILRYLQELHVDAPTWISSV 344
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 3.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 373 ALSTISFRFFEETP*AISAQYFLFCIIKISSSLTL 269
AL TIS F TP + +F ++KIS T+
Sbjct: 280 ALMTISLWFMAWTPYLVINFSGIFNLVKISPLFTI 314
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 21.8 bits (44), Expect = 3.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 373 ALSTISFRFFEETP*AISAQYFLFCIIKISSSLTL 269
AL TIS F TP + +F ++KIS T+
Sbjct: 30 ALMTISLWFMAWTPYLVINFSGIFNLVKISPLFTI 64
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 21.4 bits (43), Expect = 5.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 261 GPSESIWEHMTGLLVGTVTN 202
G SES WE +TG T N
Sbjct: 86 GTSESQWEDVTGSTPLTFVN 105
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 302 KQEVLRRDRSWCLFEEAEAD 361
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 302 KQEVLRRDRSWCLFEEAEAD 361
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 302 KQEVLRRDRSWCLFEEAEAD 361
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 302 KQEVLRRDRSWCLFEEAEAD 361
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 302 KQEVLRRDRSWCLFEEAEAD 361
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 302 KQEVLRRDRSWCLFEEAEAD 361
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 302 KQEVLRRDRSWCLFEEAEAD 361
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 302 KQEVLRRDRSWCLFEEAEAD 361
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.6 bits (41), Expect = 9.0
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 156 TTESAAVQGSILDAQHWLRFQQEDPSYAPKWIPKVLVHNVKELEIL 293
TT S A+ L+ + ++E ++ PK ++ ++KE+E L
Sbjct: 311 TTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYL 356
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 311 LPVLHHQDFQLFNI 270
LP L H D Q FN+
Sbjct: 1031 LPELRHGDIQGFNV 1044
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 311 LPVLHHQDFQLFNI 270
LP L H D Q FN+
Sbjct: 1027 LPELRHGDIQGFNV 1040
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,046
Number of Sequences: 438
Number of extensions: 2302
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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