Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30285.Seq
(464 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 111 5e-24
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 103 2e-21
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 101 6e-21
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 90 3e-17
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 89 6e-17
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 87 1e-16
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 87 2e-16
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 82 7e-15
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 74 1e-12
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 73 4e-12
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 71 1e-11
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 70 3e-11
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 70 3e-11
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 61 1e-08
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 58 1e-07
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 48 1e-04
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 45 0.001
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 44 0.002
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 43 0.003
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 41 0.015
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 39 0.062
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.11
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 36 0.33
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 34 1.8
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 34 1.8
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 33 2.3
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 33 3.1
UniRef50_A7PUP2 Cluster: Chromosome chr7 scaffold_31, whole geno... 32 5.4
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 111 bits (268), Expect = 5e-24
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +1
Query: 73 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
+K + + +VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+RVDTRLNK
Sbjct: 8 RKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNK 67
Query: 253 F 255
F
Sbjct: 68 F 68
Score = 97.9 bits (233), Expect = 1e-19
Identities = 47/60 (78%), Positives = 48/60 (80%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 422
L + LWSKGVRNVPF NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE
Sbjct: 65 LNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
Score = 37.5 bits (83), Expect = 0.14
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 53 MAKPKGERKGKSAINELL 106
MAKPKGERKGKSAINE++
Sbjct: 1 MAKPKGERKGKSAINEVV 18
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 103 bits (247), Expect = 2e-21
Identities = 44/60 (73%), Positives = 54/60 (90%)
Frame = +1
Query: 73 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Score = 68.9 bits (161), Expect = 5e-11
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 410
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 101 bits (243), Expect = 6e-21
Identities = 43/54 (79%), Positives = 51/54 (94%)
Frame = +1
Query: 91 HKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
H+R TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 55 HQRGSTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 108
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 89.8 bits (213), Expect = 3e-17
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +1
Query: 61 TQR*KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDT 240
T+ KK + + +VTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R+DT
Sbjct: 4 TKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDT 63
Query: 241 RLNK 252
RLNK
Sbjct: 64 RLNK 67
Score = 71.7 bits (168), Expect = 7e-12
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 422
L + LW +G+RN PF NDDEDS +KL+TLVTYVPV++ K LQTENV+++++
Sbjct: 65 LNKALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 88.6 bits (210), Expect = 6e-17
Identities = 38/51 (74%), Positives = 47/51 (92%)
Frame = +1
Query: 100 IVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
+VTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R+DTRLNK
Sbjct: 17 VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNK 67
Score = 71.3 bits (167), Expect = 9e-12
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 422
L + +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 65 LNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 87.4 bits (207), Expect = 1e-16
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +1
Query: 94 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
+ ++TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LNK
Sbjct: 9 EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK 61
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +3
Query: 147 CWI*KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRNVPFXXXXXXXXXXNDD 326
C K PK+ + K K G L + +WSKG+R P NDD
Sbjct: 27 CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDD 86
Query: 327 EDSAHKLFTLVTY--VPVASIKGLQTENVD 410
ED+ + F+LVT +P + GL T+ ++
Sbjct: 87 EDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 87.0 bits (206), Expect = 2e-16
Identities = 40/69 (57%), Positives = 53/69 (76%)
Frame = +1
Query: 46 DNNG*TQR*KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD 225
D+ +Q+ KK + + +VTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D
Sbjct: 51 DHKDKSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKD 110
Query: 226 IRVDTRLNK 252
+R+D +LN+
Sbjct: 111 VRLDPKLNQ 119
Score = 38.7 bits (86), Expect = 0.062
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFT-LVTYVPVASIKGLQTENVD 410
L Q +W GV+N P NDDE + KL+T V + + + KGLQT +D
Sbjct: 117 LNQEVWKYGVKNFPRRLRVRLERKRNDDEGAKEKLYTYAVPVLGLGTAKGLQTTVID 173
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 81.8 bits (193), Expect = 7e-15
Identities = 40/76 (52%), Positives = 52/76 (68%)
Frame = +1
Query: 94 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFFGLRES 273
+ ++TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +FF L
Sbjct: 9 EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---EEFFSLVTV 65
Query: 274 EMFPSVSV*GFHEDVM 321
P+ + G V+
Sbjct: 66 AEIPAEGLSGLGTKVI 81
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 74.1 bits (174), Expect = 1e-12
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFFGLRESEMF 282
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK + +
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 283 PSVSV*GFHEDVMMMKI 333
V + GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
Score = 35.1 bits (77), Expect = 0.76
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 255 LWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGL 392
+W+KG NV + N + + HKL+TL+TYVPV + K L
Sbjct: 76 VWNKGTSNVSWVPICGFE---NMMKLNIHKLYTLITYVPVTTFKNL 118
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 72.5 bits (170), Expect = 4e-12
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 410
L + +WSKGVRNVP+ N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 34 LNKAVWSKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 175 AIKEIRKFAEKQMGTPDIRVDTRLNK 252
A IRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNK 36
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 70.9 bits (166), Expect = 1e-11
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = +1
Query: 73 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
KK + +VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ + T LN
Sbjct: 10 KKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVICT-LNS 68
Query: 253 FF 258
F
Sbjct: 69 LF 70
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 69.7 bits (163), Expect = 3e-11
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 410
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 118 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
Score = 52.0 bits (119), Expect = 6e-06
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +1
Query: 157 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
+K RA+K+IRKFA K++GTPD+R+DTRLNK
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNK 120
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 69.7 bits (163), Expect = 3e-11
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +1
Query: 118 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 255
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKF 57
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 159 KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSA 338
K P++ + + KT G L + +WS G+RN+P N++E +
Sbjct: 26 KKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIPRRVRVRLCKRKNEEEGAQ 85
Query: 339 HKLFTLVTYVPVASIKGLQTENVDA 413
+ +TLV ++ V S GL TE A
Sbjct: 86 SQFYTLVQHLQVDSYHGLLTEKTKA 110
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 60.9 bits (141), Expect = 1e-08
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = +1
Query: 76 KRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 255
K+Q + T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF
Sbjct: 29 KKQKKTLKPSTKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKF 88
Score = 49.6 bits (113), Expect = 3e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 401
L + +WSKG+RN P N+DEDS +++TLV +V V S KGL E
Sbjct: 85 LNKFIWSKGIRNPPKRVRVKIERVRNEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 255
+TRE T+++HK LH FKKRAP+AIK IR A K M T +++ D LN+F
Sbjct: 46 ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTHNVKFDMGLNQF 96
Score = 46.0 bits (104), Expect = 4e-04
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 243 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQ 419
L Q +WS+G+R+V + E+ K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 93 LNQFIWSQGIRSVADRIRVRMARLPMEGEEG--KFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 57.6 bits (133), Expect = 1e-07
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = -1
Query: 248 FKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVT 102
F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVT
Sbjct: 28 FNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVT 76
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1
Query: 151 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
GF++ P +KEIRKFA K+MGTPD+ +D NK
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNK 82
Score = 36.3 bits (80), Expect = 0.33
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 159 KACPKSNQRNPKVR*KTDGNSGHSSRHSLKQILWSKGVRN-VPFXXXXXXXXXXNDDEDS 335
+ACP + K K G + + ++G+RN VP +DEDS
Sbjct: 52 EACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRNNVPHRIPVRLSRKCKEDEDS 111
Query: 336 AHKLFTLVTYVPVAS 380
+KL+ LVT VPV +
Sbjct: 112 PNKLYRLVTCVPVTT 126
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 255
V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN +
Sbjct: 84 VSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTY 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 240 SLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLF-TLVTYVPVASIKGLQTENVD 410
SL +W KGV+ VP E + HK F T+++ VPVAS KGL T+ V+
Sbjct: 130 SLNTYIWHKGVKGVPGRVRVLIQRKSETTEGNKHKHFYTVISNVPVASFKGLTTKTVE 187
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 240 SLKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTE 401
SL + +W++G+RN+P +++D K +TL +VPV + GL+TE
Sbjct: 314 SLNEAVWARGIRNLPRRIRVRLQRKKKEEDDGKGKYYTLAQHVPVDTFDGLKTE 367
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1
Query: 124 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 249
N+HKR+ G F KR AIKEI+KFA K +IR++ LN
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELN 56
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 40.7 bits (91), Expect = 0.015
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 103 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 255
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVF 53
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 38.7 bits (86), Expect = 0.062
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 109 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 252
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNE 56
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 37.9 bits (84), Expect = 0.11
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
Frame = +1
Query: 73 KKRQISHKR--IVTREYTVNLHKRLHG 147
KKR ++ +VTREYT+NLHKRLHG
Sbjct: 4 KKRGAGTRKDEVVTREYTINLHKRLHG 30
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 36.3 bits (80), Expect = 0.33
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 112 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFFGLRESEMFPS 288
EYTVNL K + KR +A+K +++F + +++ LNKF R P+
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPPT 60
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 115 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKF 255
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNY 57
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 33.9 bits (74), Expect = 1.8
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 115 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFFGLRESEMFPS 288
Y VNL +R++ +RA RA++ +R+F + ++ +D LN + R E P+
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPPA 65
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 33.5 bits (73), Expect = 2.3
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 115 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFFGLRESEMFPS 288
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ R E PS
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPPS 68
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 33.1 bits (72), Expect = 3.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 324 DEDSAHKLFTLVTYVPVASIKGLQTENV 407
DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_A7PUP2 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1011
Score = 32.3 bits (70), Expect = 5.4
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 82 QISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 204
+IS +R + TV KRL GVG +KR A+ E+R+FA+
Sbjct: 724 RISSERFSSIRPTVWRLKRLMGVGSEKRLKLAVGEVREFAK 764
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,943,669
Number of Sequences: 1657284
Number of extensions: 7288073
Number of successful extensions: 14812
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14808
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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