Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30280.Seq
         (752 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa...   175   1e-42
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa...   139   6e-32
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu...   116   8e-25
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n...   102   8e-21
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh...    60   8e-08
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n...    45   0.002
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n...    41   0.029
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl...    39   0.12 
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa...    34   4.3  
UniRef50_Q8NH34 Cluster: Seven transmembrane helix receptor; n=3...    33   10.0 

>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
           (TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
           Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
           (TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
           sapiens (Human)
          Length = 806

 Score =  175 bits (425), Expect = 1e-42
 Identities = 83/146 (56%), Positives = 98/146 (67%)
 Frame = +1

Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
           L +G+  +   CIVLSDD C DEKIRM             DV+SI PCP VKYGKR+H+L
Sbjct: 58  LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117

Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWA 582
           PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F   G       K  +     +   A
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177

Query: 583 PDTVIHCDGEPIKREEEXEALNAVGY 660
           PDTVIHC+GEPIKRE+E E+LN VGY
Sbjct: 178 PDTVIHCEGEPIKREDEEESLNEVGY 203



 Score =  101 bits (241), Expect = 3e-20
 Identities = 48/65 (73%), Positives = 61/65 (93%)
 Frame = +2

Query: 62  ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 242 RKETV 256
           R+E V
Sbjct: 64  RREAV 68


>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
           putative; n=2; Leishmania|Rep: Transitional endoplasmic
           reticulum ATPase, putative - Leishmania infantum
          Length = 690

 Score =  139 bits (337), Expect = 6e-32
 Identities = 66/146 (45%), Positives = 89/146 (60%)
 Frame = +1

Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
           L +G+  +   CI + DD CP EKI+M             D + I PC  V YG RVH+L
Sbjct: 49  LVKGKKHRSTVCIAMEDDECPPEKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLL 108

Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWA 582
           PIDD+VE LTG+LFE +LKPYF+E+YRP+ + D+F   GA      K  +     +   +
Sbjct: 109 PIDDTVENLTGDLFENFLKPYFLESYRPVKKGDSFVCRGAMRSVEFKVVEVDPGDYCIVS 168

Query: 583 PDTVIHCDGEPIKREEEXEALNAVGY 660
           PDT+IH +G+PI RE+E EAL+ VGY
Sbjct: 169 PDTIIHSEGDPIHREDE-EALDGVGY 193



 Score = 64.5 bits (150), Expect = 3e-09
 Identities = 29/49 (59%), Positives = 40/49 (81%)
 Frame = +2

Query: 110 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETV 256
           K + N+LIVEE  +DDNSVV+L+  +ME+L +FRGDTVL+KGK+ + TV
Sbjct: 11  KVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTV 59


>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
           putative; n=4; Plasmodium|Rep: Cell division cycle
           protein 48 homologue, putative - Plasmodium chabaudi
          Length = 250

 Score =  116 bits (278), Expect = 8e-25
 Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
 Frame = +1

Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
           L +G+      CI+L+D++  + KIR+             D+V +  CP + YGK++ +L
Sbjct: 59  LIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDIVYVKACPEIPYGKKIQVL 118

Query: 403 PIDDSVEGLT-GNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASW 579
           PIDD++EGL    LFE++LKPYF E+YRP+ + D F   G       K  +     F   
Sbjct: 119 PIDDTIEGLAKDTLFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIV 178

Query: 580 APDTVIHCDGEPIKREEEXEALNAVGY 660
           +PDTVI+ +G+PIKR++E E L+ +GY
Sbjct: 179 SPDTVIYYEGDPIKRDDE-EKLDEIGY 204



 Score = 70.1 bits (164), Expect = 5e-11
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = +2

Query: 65  DNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRR 244
           D K+  D +   L +K    RLIVEEA +DDNSVVAL+  +ME+L  FRGDT+L+KGK+R
Sbjct: 6   DTKTLGDDNNGKLPKKKNLCRLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKR 65

Query: 245 KETV 256
             T+
Sbjct: 66  HSTI 69


>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           valosin - Strongylocentrotus purpuratus
          Length = 596

 Score =  102 bits (245), Expect = 8e-21
 Identities = 48/66 (72%), Positives = 62/66 (93%)
 Frame = +2

Query: 59  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 238
           MA+N S DD++TAILR K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MAEN-SGDDIATAILRTKAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGK 59

Query: 239 RRKETV 256
           +R++TV
Sbjct: 60  KRRDTV 65



 Score = 76.2 bits (179), Expect = 8e-13
 Identities = 35/75 (46%), Positives = 47/75 (62%)
 Frame = +1

Query: 436 NLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWAPDTVIHCDGEP 615
           NLF+VYL+PYF EAYRP+ + D F+  G       K  +     +   +PDTVIH +G+ 
Sbjct: 99  NLFDVYLRPYFQEAYRPVRKGDIFQIRGGMRAVEFKVVETDPGPYCIVSPDTVIHFEGDA 158

Query: 616 IKREEEXEALNAVGY 660
           IKRE+E E LN +GY
Sbjct: 159 IKREDEEENLNEIGY 173



 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +3

Query: 507 QVRGGMRAVEFKVVETDPSPFCIV 578
           Q+RGGMRAVEFKVVETDP P+CIV
Sbjct: 123 QIRGGMRAVEFKVVETDPGPYCIV 146


>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_91,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 772

 Score = 59.7 bits (138), Expect = 8e-08
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = +2

Query: 122 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
           NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK  K+TVA
Sbjct: 17  NRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVA 62



 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
 Frame = +1

Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
           L +G+  +    I +S+     E + M             D ++I P  S+    +VHIL
Sbjct: 51  LLEGKNNKKTVAIAISNRQ-DKESVHMNSVIRKNLGIQIGDFITIQPTASLPQLTKVHIL 109

Query: 403 PIDDSVEGLTG-NLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASW 579
           P  DS+ G    NL + YL PYF++AYRP+ + D F           K            
Sbjct: 110 PFQDSISGTNEKNLTQNYLIPYFLDAYRPVSKGDCF-VVKMAKEIEFKIIATEPEDMGVV 168

Query: 580 APDTVIHCDGEPIKREEE 633
            P T+++ +G  +KRE E
Sbjct: 169 GPITILYTEGGTVKREIE 186


>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
           Plasmodium vivax|Rep: Cell division cycle ATPase,
           putative - Plasmodium vivax
          Length = 1089

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +2

Query: 119 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
           P+  +VE      DN  + LS+AKME+L L  G TVLLKGK++KE +A
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLA 317


>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
           Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
           putative - Plasmodium berghei
          Length = 932

 Score = 41.1 bits (92), Expect = 0.029
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +2

Query: 119 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
           PN  +VE    + DN  + +S+ KM++L +  G TVLLKGK++KE VA
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVA 148


>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
           ATCC 50803
          Length = 870

 Score = 39.1 bits (87), Expect = 0.12
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +2

Query: 122 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
           NR IV +    D+S + LS  K+  L LF+GD V LKG+  K T A
Sbjct: 12  NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHA 57



 Score = 38.7 bits (86), Expect = 0.15
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
 Frame = +1

Query: 343 DVVSIAPCPSVKYGKRVHILPIDDSVEGL-----------------------TGNLFEVY 453
           D+V + P  ++ Y KR+ ++P +  +EGL                       T +LF++ 
Sbjct: 86  DIVILYPAQNLPYHKRIKVIPFEQDLEGLNIAGYTVKQGEDGKPAPAPFPGPTYDLFDIC 145

Query: 454 LKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWAPDTV----IHCDGEPIK 621
           + PYF +  RP+   +TF+      P + +   ++     S A   +    I  +GEPI 
Sbjct: 146 IAPYFKDKCRPVTEGNTFKVMTTSLPVNREIEFKVVLTDPSPACIVMDGGEIFYEGEPID 205

Query: 622 REEEXEALNAVGYG*HRAVVAKQLG 696
           R+E       VGY      + K+LG
Sbjct: 206 RDEHERENTKVGYS-DLGGLGKELG 229



 Score = 33.1 bits (72), Expect = 7.6
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +3

Query: 525 RAVEFKVVETDPSPFCIV 578
           R +EFKVV TDPSP CIV
Sbjct: 174 REIEFKVVLTDPSPACIV 191


>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
           n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
           reticulum ATPase - Toxoplasma gondii
          Length = 792

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +2

Query: 188 MEQLQLFRGDTVLLKGKRRKETVA 259
           M  LQ+ RGD VLL G+R++ETVA
Sbjct: 1   MAALQVQRGDVVLLSGRRKRETVA 24


>UniRef50_Q8NH34 Cluster: Seven transmembrane helix receptor; n=3;
           Euarchontoglires|Rep: Seven transmembrane helix receptor
           - Homo sapiens (Human)
          Length = 337

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 15/47 (31%), Positives = 30/47 (63%)
 Frame = +2

Query: 440 YSKYT*SRTSWRLTVRSIVTTPSGPRGHARRRVQSGRNRSITILHRG 580
           Y++   ++ +W L+ R++   PSG R   +RR +SG+ RS++ + +G
Sbjct: 24  YTRSCPTQRAWTLSHRALTVQPSGKRSGVQRR-KSGQPRSLSTMAQG 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,590,309
Number of Sequences: 1657284
Number of extensions: 14933516
Number of successful extensions: 38265
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38251
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)