Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30279.Seq
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 118 2e-26
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 118 2e-26
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 118 2e-26
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 118 2e-26
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 118 2e-26
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 118 2e-26
AY243503-1|AAQ89957.1| 3574|Homo sapiens selectin-like protein p... 30 7.9
AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3... 30 7.9
AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3... 30 7.9
AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3... 30 7.9
AL592463-2|CAH73558.1| 3548|Homo sapiens sushi, von Willebrand f... 30 7.9
AL354982-2|CAH74139.1| 3548|Homo sapiens sushi, von Willebrand f... 30 7.9
AL158158-3|CAI14068.1| 3548|Homo sapiens sushi, von Willebrand f... 30 7.9
AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3... 30 7.9
AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3... 30 7.9
AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3... 30 7.9
AJ619977-1|CAF04067.1| 3574|Homo sapiens SEL-OB protein protein. 30 7.9
AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor typ... 30 7.9
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 118 bits (283), Expect = 2e-26
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV-HLHISAGHQAV 220
+Y+R GV ++TKI+GGR+RNGV H S G ++V
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 89 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 118 bits (283), Expect = 2e-26
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV-HLHISAGHQAV 220
+Y+R GV ++TKI+GGR+RNGV H S G ++V
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 89 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 118 bits (283), Expect = 2e-26
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV-HLHISAGHQAV 220
+Y+R GV ++TKI+GGR+RNGV H S G ++V
Sbjct: 76 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 111
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 101 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 146
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 118 bits (283), Expect = 2e-26
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV-HLHISAGHQAV 220
+Y+R GV ++TKI+GGR+RNGV H S G ++V
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 89 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 118 bits (283), Expect = 2e-26
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV-HLHISAGHQAV 220
+Y+R GV ++TKI+GGR+RNGV H S G ++V
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 89 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 118 bits (283), Expect = 2e-26
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV-HLHISAGHQAV 220
+Y+R GV ++TKI+GGR+RNGV H S G ++V
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 70.5 bits (165), Expect = 5e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 89 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>AY243503-1|AAQ89957.1| 3574|Homo sapiens selectin-like protein
protein.
Length = 3574
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 263 VMEYTFTFLQVIRQYCTQGFAIVGGIEAC*ESSGRWSHS 147
+ E FTF + C +G+ + G E+ ++ WSHS
Sbjct: 1861 IEELAFTFGSKVTYRCNKGYTLAGDKESSCLANSSWSHS 1899
>AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 248 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 156
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 248 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 156
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 248 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 156
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL592463-2|CAH73558.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 263 VMEYTFTFLQVIRQYCTQGFAIVGGIEAC*ESSGRWSHS 147
+ E FTF + C +G+ + G E+ ++ WSHS
Sbjct: 1835 IEELAFTFGSKVTYRCNKGYTLAGDKESSCLANSSWSHS 1873
>AL354982-2|CAH74139.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 263 VMEYTFTFLQVIRQYCTQGFAIVGGIEAC*ESSGRWSHS 147
+ E FTF + C +G+ + G E+ ++ WSHS
Sbjct: 1835 IEELAFTFGSKVTYRCNKGYTLAGDKESSCLANSSWSHS 1873
>AL158158-3|CAI14068.1| 3548|Homo sapiens sushi, von Willebrand factor
type A, EGF and pentraxin domain containing 1 protein.
Length = 3548
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 263 VMEYTFTFLQVIRQYCTQGFAIVGGIEAC*ESSGRWSHS 147
+ E FTF + C +G+ + G E+ ++ WSHS
Sbjct: 1835 IEELAFTFGSKVTYRCNKGYTLAGDKESSCLANSSWSHS 1873
>AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 248 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 156
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 248 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 156
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 248 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 156
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AJ619977-1|CAF04067.1| 3574|Homo sapiens SEL-OB protein protein.
Length = 3574
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 263 VMEYTFTFLQVIRQYCTQGFAIVGGIEAC*ESSGRWSHS 147
+ E FTF + C +G+ + G E+ ++ WSHS
Sbjct: 1861 IEELAFTFGSKVTYRCNKGYTLAGDKESSCLANSSWSHS 1899
>AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor type 1
protein.
Length = 132
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 248 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 156
FT ++IR C GF +VG +++GRW
Sbjct: 93 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,590,024
Number of Sequences: 237096
Number of extensions: 1495804
Number of successful extensions: 2963
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2963
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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