Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30278.Seq
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021373-1|AAX33521.1|  286|Drosophila melanogaster LP02810p pro...    29   9.1  
BT011475-1|AAR99133.1|  964|Drosophila melanogaster RE11167p pro...    29   9.1  
AY058525-1|AAL13754.1|  970|Drosophila melanogaster LD23187p pro...    29   9.1  
AY051984-1|AAK93408.1|  838|Drosophila melanogaster LD45365p pro...    29   9.1  
AF220364-1|AAF37265.1|  838|Drosophila melanogaster Plenty of SH...    29   9.1  
AE014134-2119|AAF53138.2|  970|Drosophila melanogaster CG6686-PA...    29   9.1  
AE014134-2118|AAN10790.1|  964|Drosophila melanogaster CG6686-PB...    29   9.1  
AE013599-2508|AAF57833.1|  838|Drosophila melanogaster CG4909-PA...    29   9.1  
AE013599-630|AAF59105.1|  286|Drosophila melanogaster CG11635-PA...    29   9.1  

>BT021373-1|AAX33521.1|  286|Drosophila melanogaster LP02810p
           protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 674 RIFGRNHVCPLFVKRTRPAR 615
           +I G NHVCP  +K+ + AR
Sbjct: 238 KIHGENHVCPSAIKKAKKAR 257


>BT011475-1|AAR99133.1|  964|Drosophila melanogaster RE11167p
           protein.
          Length = 964

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +2

Query: 638 QIEGKRDFDRRSGSDKNRCEISRQDGRAQSP 730
           +IE +RD  +RSG ++ R E +R+  R+QSP
Sbjct: 213 EIERERDARKRSGRERER-ERNRERSRSQSP 242


>AY058525-1|AAL13754.1|  970|Drosophila melanogaster LD23187p
           protein.
          Length = 970

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +2

Query: 638 QIEGKRDFDRRSGSDKNRCEISRQDGRAQSP 730
           +IE +RD  +RSG ++ R E +R+  R+QSP
Sbjct: 219 EIERERDARKRSGRERER-ERNRERSRSQSP 248


>AY051984-1|AAK93408.1|  838|Drosophila melanogaster LD45365p
           protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVP 308
           ++A AG+G +K ++   +  + KP+P PA+ V  P
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPP 111


>AF220364-1|AAF37265.1|  838|Drosophila melanogaster Plenty of SH3s
           protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVP 308
           ++A AG+G +K ++   +  + KP+P PA+ V  P
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPP 111


>AE014134-2119|AAF53138.2|  970|Drosophila melanogaster CG6686-PA,
           isoform A protein.
          Length = 970

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +2

Query: 638 QIEGKRDFDRRSGSDKNRCEISRQDGRAQSP 730
           +IE +RD  +RSG ++ R E +R+  R+QSP
Sbjct: 219 EIERERDARKRSGRERER-ERNRERSRSQSP 248


>AE014134-2118|AAN10790.1|  964|Drosophila melanogaster CG6686-PB,
           isoform B protein.
          Length = 964

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +2

Query: 638 QIEGKRDFDRRSGSDKNRCEISRQDGRAQSP 730
           +IE +RD  +RSG ++ R E +R+  R+QSP
Sbjct: 213 EIERERDARKRSGRERER-ERNRERSRSQSP 242


>AE013599-2508|AAF57833.1|  838|Drosophila melanogaster CG4909-PA
           protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVP 308
           ++A AG+G +K ++   +  + KP+P PA+ V  P
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPP 111


>AE013599-630|AAF59105.1|  286|Drosophila melanogaster CG11635-PA
           protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 674 RIFGRNHVCPLFVKRTRPAR 615
           +I G NHVCP  +K+ + AR
Sbjct: 238 KIHGENHVCPSAIKKAKKAR 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,922,133
Number of Sequences: 53049
Number of extensions: 474547
Number of successful extensions: 1545
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)