Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30276.Seq
(558 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 133 2e-30
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 127 2e-28
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 102 5e-21
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 99 6e-20
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 86 5e-16
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 84 2e-15
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 81 1e-14
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 81 2e-14
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 79 9e-14
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 71 2e-11
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 66 5e-10
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 59 6e-08
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 55 1e-06
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 54 3e-06
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 43 0.006
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 42 0.010
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 40 0.052
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 39 0.091
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 39 0.091
UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing f... 36 0.64
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 36 0.64
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 35 1.1
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 35 1.1
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 35 1.5
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 35 1.5
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 33 3.4
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 33 3.4
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 33 3.4
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 33 4.5
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 33 4.5
UniRef50_Q4DU87 Cluster: Amastin, putative; n=70; Trypanosoma cr... 32 7.9
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 133 bits (322), Expect = 2e-30
Identities = 59/81 (72%), Positives = 73/81 (90%)
Frame = +1
Query: 13 PIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 192
P+Q+VQVFGRK TATAVA+CKRG+G+++VNGRPL+++ PR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 VXIRXTVKGGGHVAQVYAIRQ 255
V IR VKGGGHVAQ+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 120 bits (288), Expect = 3e-26
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 127 bits (306), Expect = 2e-28
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = +1
Query: 1 ARREPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKE 180
A +E IQ+VQV GRK TATAVAYCKRG+G+L+VNGRPL+ + P L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 181 KFSMVXIRXTVKGGGHVAQVYAIRQLFQR 267
+F+ V IR VKGGG+VAQ+YAIRQ +
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQAISK 92
Score = 120 bits (289), Expect = 2e-26
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89 AISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 102 bits (245), Expect = 5e-21
Identities = 45/80 (56%), Positives = 63/80 (78%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+ +VQ FG+K +ATAVA+ K G G+++VNG P+ LV P +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 196 XIRXTVKGGGHVAQVYAIRQ 255
IR V GGGHV+QVYAIRQ
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQ 83
Score = 90.6 bits (215), Expect = 2e-17
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 84 AIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 99.1 bits (236), Expect = 6e-20
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 96 AIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
Score = 49.2 bits (112), Expect = 6e-05
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1
Query: 154 EPILLLGKEKFSMVXIRXTVKGGGHVAQVYAIRQ 255
EP+L++G +KF+ V IR V GGGH +QVYAIRQ
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQ 95
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 86.2 bits (204), Expect = 5e-16
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFGG GARAR QKSYR
Sbjct: 140 AIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFGGHGARARRQKSYR 199
Score = 75.8 bits (178), Expect = 6e-13
Identities = 30/56 (53%), Positives = 47/56 (83%)
Frame = +1
Query: 22 AVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFS 189
+V FG+K TATAVA+CK G G++R+NG+P+ LV P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 86 AFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKR-GHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 192
+++V G+K A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 193 VXIRXTVKGGGHVAQVYAIRQLFQR 267
+ T K GG V++VYA+R F +
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAK 89
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 81.4 bits (192), Expect = 1e-14
Identities = 49/145 (33%), Positives = 67/145 (46%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
+Q+VQ+F K A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 196 XIRXTVKGGGHVAQVYAIRQLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLTXXX 375
I VKG GHV Q+YA+ Q + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 376 XXXXXXXXXXXXXDTRNLTVKPSRK 450
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = +3
Query: 216 GWWSCSTSLRYQTAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 395
G S + + AI+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWG 136
Query: 396 GPGARARYQKSYR 434
AR R+ KSYR
Sbjct: 137 RHSARTRFTKSYR 149
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVA-YCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSM 192
++ VQ FG+K TA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 193 VXIRXTVKGGGHVAQVYAIRQ 255
+ I V GGG V+Q YA RQ
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQ 89
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 78.6 bits (185), Expect = 9e-14
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +1
Query: 25 VQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIR 204
V G+K + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+ F + +
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 205 XTVKGGGHVAQVYAIRQLFQR 267
V GGGHV+Q+YA+RQ R
Sbjct: 85 IKVAGGGHVSQIYAVRQAISR 105
Score = 73.3 bits (172), Expect = 3e-12
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 102 AISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 210 SQGWWSCSTSLRYQTAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 389
S+G S + +ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 390 FGGPGARARYQKSYR 434
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
Score = 68.9 bits (161), Expect = 7e-11
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = +1
Query: 25 VQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIR 204
+Q FG+K A A+ K+G G +++NG P++LV P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 205 XTVKGGGHVAQVYAIRQ 255
KGGG V+Q+YAIRQ
Sbjct: 63 IFSKGGGKVSQIYAIRQ 79
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 66.1 bits (154), Expect = 5e-10
Identities = 27/79 (34%), Positives = 51/79 (64%)
Frame = +1
Query: 16 IQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMV 195
++ +Q G++ TA A A + G G +R+NG+P++++ P + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 196 XIRXTVKGGGHVAQVYAIR 252
I V+GGG + Q A R
Sbjct: 61 DIDVKVQGGGFMGQAEAAR 79
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 267 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 434
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 59.3 bits (137), Expect = 6e-08
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 PIQAVQVFGRKXTATAVAYCKRGHGMLRVNG-RPLDLVXPRLLQYKLQEPILLLGKEKFS 189
P+Q+ QVFG K A +A +G +++V L++ P QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 190 MVXIRXTVKGGGHVAQVYAI 249
V I V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTVK 216
G++ A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+V IR V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 217 GGGHVAQVYAIRQLFQR 267
GGG + Q A+R R
Sbjct: 71 GGGVMGQADAVRMAIAR 87
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +3
Query: 288 KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ +D+ S+ +++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 104 RMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +3
Query: 252 TAISKALIAFYQKY-------VDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 410
T IS+ALI + + + + ++++++ + +D+ L+ D RR EPKKFGGPGAR
Sbjct: 82 TGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGAR 141
Query: 411 ARYQKSYR 434
R QKSYR
Sbjct: 142 RRKQKSYR 149
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 42.7 bits (96), Expect = 0.006
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+ T+TA + +G G + VNG+PLD R + +++P+ LL + I TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 214 KGGGHVAQVYAIR 252
KGGG Q AIR
Sbjct: 66 KGGGINGQAGAIR 78
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 41.9 bits (94), Expect = 0.010
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPLD--LVXPRLLQYKLQEPILLLGKEKFSMVXIRXT 210
G++ A A + K G G + VNG+PLD L L+ +++ P++L+ +E I
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 211 VKGGGHVAQVYAIR 252
V GGG AQ AI+
Sbjct: 69 VLGGGFAAQADAIK 82
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 41.9 bits (94), Expect = 0.010
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1
Query: 7 REPIQAVQVFGRKXTATAVAYCKRGHGMLRV 99
R P VQ FGRK TA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 39.5 bits (88), Expect = 0.052
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPLDLVXPR-LLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+ T++A + + G G + +NG PLD R + +++P++ L + S + TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 214 KGGGHVAQVYAIR 252
+GGG Q AIR
Sbjct: 71 QGGGDSGQAGAIR 83
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 38.7 bits (86), Expect = 0.091
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRP-LDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+ T+ A G G + VNG P L+ L L++P++ G EK I TV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 214 KGGGHVAQVYAIR 252
KGGG Q A R
Sbjct: 69 KGGGFTGQAGATR 81
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 38.7 bits (86), Expect = 0.091
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 25 VQVFGRKXTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILL-LGKEKFSMVX 198
+ GR+ TA A Y K G G+++VN P + LL K+ +P+LL + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFDFY- 66
Query: 199 IRXTVKGGGHVAQVYAIRQLFQR 267
V GGG +Q AI R
Sbjct: 67 --IKVSGGGINSQAEAISLAISR 87
>UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing family
M member 1; n=30; Eutheria|Rep: Pleckstrin homology
domain-containing family M member 1 - Homo sapiens
(Human)
Length = 1058
Score = 35.9 bits (79), Expect = 0.64
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -1
Query: 300 RLHISGRRRSEPLK*LSDSVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 133
R+H+ GRRR E LK L D + LC + NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 35.9 bits (79), Expect = 0.64
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPLDLVXP-RLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+ A G G + NGR L+ P +L Q ++ P++LLG+E I +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 214 KGGGHVAQVYAIRQLFQR 267
GGG Q A R R
Sbjct: 120 GGGGPTGQAGAFRLAIAR 137
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 35.1 bits (77), Expect = 1.1
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 13 PIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPL-DLVXPR--LLQYKLQEPILLLGKEK 183
P + + GR+ T+ A A K G G + VN + + D + R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 184 FSMVXIRXTVKGGGHVAQVYAIRQLFQR 267
+ + V GGG QV AIR R
Sbjct: 70 YDL---NLNVTGGGTTGQVGAIRHALAR 94
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 35.1 bits (77), Expect = 1.1
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 REPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQ-YKLQEPILLLGKEK 183
+ IQ GR+ A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLGDVN 62
Query: 184 FSMVXIRXTVKGGGHVAQVYAIR 252
+ IR V GGG QV A R
Sbjct: 63 SFDLIIR--VSGGGVQGQVIATR 83
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 34.7 bits (76), Expect = 1.5
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPL-DLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+ TA A K G G L +NG+ L D + + ++ P L E F V + V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 214 KGGGHVAQVYAI 249
GGG Q AI
Sbjct: 139 TGGGTTGQTGAI 150
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 34.7 bits (76), Expect = 1.5
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTVK 216
G++ T++AV + G G + VNG+ L PR L + L + + TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 217 GGGHVAQVYAI 249
GGG Q A+
Sbjct: 254 GGGVTGQAEAV 264
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 33.5 bits (73), Expect = 3.4
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 ARREPIQAVQVFGRKXTATAVAYCKRGHGMLRVNGRPLDLVXPRLLQYK-LQEPILL 168
ARR P+ + VF R ++ V K G G+ + G LD P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 33.5 bits (73), Expect = 3.4
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKXTATAVAYC-KRGHGMLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
G++ TA A A K G G ++VNG L P + Q + Q ++ + TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 214 KGGGHVAQVYAIR 252
GGG AQ AIR
Sbjct: 333 SGGGRSAQAGAIR 345
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 33.5 bits (73), Expect = 3.4
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 37 GRKXTATAVAYC--KRGHGMLRVNGR-PLDLVXPRLLQYKLQEPILLLG-KEKFSMVXIR 204
GR+ ++TA Y + G + +N R P D +L+ +++P+ L K+ F I
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNFD---IN 66
Query: 205 XTVKGGGHVAQVYAIR 252
VKGGG Q AIR
Sbjct: 67 VVVKGGGFTGQAGAIR 82
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 33.1 bits (72), Expect = 4.5
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+ + A + K+G G + VNGR +D + ++ P ++ + + +R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 214 KGGGHVAQVYAI 249
GGGH Q A+
Sbjct: 87 AGGGHTGQAGAM 98
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 33.1 bits (72), Expect = 4.5
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRKXTATAVAYCKRGHGMLRVNGRPLD-LVXPRLLQYKLQEPILLLGKEKFSMVXIRXTV 213
GR+ + A G G + +NGR LD L+ +++P++ G E +R V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 214 KGGGHVAQVYAIR 252
GGG Q AIR
Sbjct: 68 DGGGFTGQAGAIR 80
>UniRef50_Q4DU87 Cluster: Amastin, putative; n=70; Trypanosoma
cruzi|Rep: Amastin, putative - Trypanosoma cruzi
Length = 194
Score = 32.3 bits (70), Expect = 7.9
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 88 MLRVNGRPLDLVXPRLLQYKLQEPILLLGKEKFSMVXIRXTVKGGGHVAQVYAIRQLFQ 264
+L + G PLD PR + L +P + L K + G + + YA+ +LF+
Sbjct: 18 LLMLTGTPLDQFRPRTNPFFLTDPCVTLWGGKMHCSSTEYVISGNDVIHECYAVLELFR 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,936,878
Number of Sequences: 1657284
Number of extensions: 10138193
Number of successful extensions: 23437
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 22931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23428
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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