Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30268.Seq
(625 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 118 2e-25
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 113 3e-24
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 109 5e-23
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 105 7e-22
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 102 6e-21
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 98 2e-19
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 98 2e-19
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 94 2e-18
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 94 3e-18
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 91 1e-17
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 90 5e-17
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 86 7e-16
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 85 1e-15
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 84 2e-15
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 84 3e-15
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 80 4e-14
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 80 5e-14
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 79 6e-14
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 79 1e-13
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 74 3e-12
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 74 3e-12
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 73 6e-12
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 70 4e-11
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 69 9e-11
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 69 9e-11
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 64 2e-09
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 61 2e-08
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 60 3e-08
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 59 1e-07
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 58 1e-07
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 52 8e-06
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 35 1.8
UniRef50_Q4QBV6 Cluster: DNA primase small subunit, putative; n=... 34 2.4
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 33 5.6
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 118 bits (283), Expect = 2e-25
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV-HLHISAGHQAV 220
+Y+R GV ++TKI+GGR+RNGV H S G ++V
Sbjct: 64 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 89 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 113 bits (272), Expect = 3e-24
Identities = 49/82 (59%), Positives = 64/82 (78%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 321 YIRSPVGVKTVTKIFGGRKRNG 256
Y+R +GV KI+GGR+RNG
Sbjct: 68 YLRQGIGVGGFQKIYGGRQRNG 89
Score = 60.5 bits (140), Expect = 3e-08
Identities = 24/48 (50%), Positives = 37/48 (77%)
Frame = -1
Query: 256 STPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
S P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 90 SRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 137
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 109 bits (262), Expect = 5e-23
Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Frame = -2
Query: 510 ASVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAIL 331
A V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAIL
Sbjct: 2 APVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAIL 61
Query: 330 RHIYIRSPVGVKTVTKIFGGRKRNGVH-LHISAGHQAVL 217
RH+YIR P G+ + K F +KRNGV H S H +V+
Sbjct: 62 RHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVI 99
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSH + GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 88 PSHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 105 bits (253), Expect = 7e-22
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = -2
Query: 510 ASVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAIL 331
A V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI
Sbjct: 2 AGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIA 61
Query: 330 RHIYIRSPVGVKTVTKIFGGRKRNGV 253
RHIY+R VGV + K++GG G+
Sbjct: 62 RHIYLRKQVGVGRLCKVYGGSVNRGM 87
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSH SGS+ RK +QSLE + ++EK +GGR ++ QG+RDLDRI
Sbjct: 89 PSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRI 134
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 102 bits (245), Expect = 6e-21
Identities = 42/85 (49%), Positives = 62/85 (72%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I R
Sbjct: 13 VTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASIARK 72
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGVH 250
+Y+R GV ++ K++GG R GVH
Sbjct: 73 VYLRQYTGVGSLKKVYGGAARKGVH 97
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Frame = -1
Query: 244 HFCRSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGRRDLDRI 113
HF ++SG + R LQ LE +K+VEK V GGR +T+ G++DLDRI
Sbjct: 100 HFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRI 147
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 321 YIRSPVGVKTVTKIFGGRKRNGV 253
YIR +G KI+G RKR G+
Sbjct: 72 YIRGGIGTGEFRKIYGDRKRRGM 94
Score = 40.3 bits (90), Expect = 0.037
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 119
P +SSG + R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 96 PCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 97.9 bits (233), Expect = 2e-19
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = -2
Query: 489 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 310
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 309 PVGVKTVTKIFGGRKRNGV 253
P GV + +++G KR GV
Sbjct: 70 PTGVGALRRVYGSNKRRGV 88
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/38 (68%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Frame = -1
Query: 253 TPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 143
TP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 89 TPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = -2
Query: 507 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 328
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 327 HIYIRSPVGVKTVTKIFGGRKRNGV 253
+YIR GV T ++FGG +RNGV
Sbjct: 65 KVYIRGGDGVATYRRVFGGNRRNGV 89
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQGRRDLDRI 113
P+HF +G R L+ L+ LK++E GGR +T GRRDLDRI
Sbjct: 91 PNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRI 137
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 93.9 bits (223), Expect = 3e-18
Identities = 49/102 (48%), Positives = 64/102 (62%), Gaps = 20/102 (19%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 382
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 381 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNG 256
L PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNG 109
Score = 60.5 bits (140), Expect = 3e-08
Identities = 24/48 (50%), Positives = 37/48 (77%)
Frame = -1
Query: 256 STPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
S P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 110 SRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 91.5 bits (217), Expect = 1e-17
Identities = 41/101 (40%), Positives = 57/101 (56%)
Frame = -2
Query: 558 RKXXXKXXXXXXXXXSASVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKEL 379
RK K + ++KD D VK A H+K G ++ P+ +D KT+ KEL
Sbjct: 8 RKYKLKKADRVVPYRRLNTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKEL 67
Query: 378 APYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNG 256
AP DPDWFY+R AA+LRH+Y GV + K++ +KRNG
Sbjct: 68 APQDPDWFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNG 108
Score = 35.9 bits (79), Expect = 0.79
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -1
Query: 256 STPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQG 134
S P+H CR+SG I R +Q LE++ +E+ ++ GR L+ +G
Sbjct: 109 SAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGRRLSRKG 150
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 89.8 bits (213), Expect = 5e-17
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
T KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHL 77
Query: 321 YIRSPVGVKTVTKIFGGRKRNGVHLHISA 235
Y+R VGV ++K +G ++RNG + SA
Sbjct: 78 YVRPNVGVGALSKFYGRKQRNGTARNHSA 106
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 85.8 bits (203), Expect = 7e-16
Identities = 37/82 (45%), Positives = 56/82 (68%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
T+KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCAA+LR I
Sbjct: 30 TLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAAVLRAI 89
Query: 321 YIRSPVGVKTVTKIFGGRKRNG 256
Y+R VG ++K FG +K G
Sbjct: 90 YLRPGVGYGGLSKRFGNKKNYG 111
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/82 (48%), Positives = 52/82 (63%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
TV DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 321 YIRSPVGVKTVTKIFGGRKRNG 256
YI PVGV ++ +GG+K G
Sbjct: 63 YIDGPVGVNSLRTHYGGKKDRG 84
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = -1
Query: 256 STPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 116
S P F R SG+I R+ALQ LE L+++ ++ GR++T +GR LD+
Sbjct: 85 SRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVITPEGRSFLDK 130
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 84.2 bits (199), Expect = 2e-15
Identities = 35/75 (46%), Positives = 51/75 (68%)
Frame = -2
Query: 498 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 319
+KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 318 IRSPVGVKTVTKIFG 274
+ + +GV + + +G
Sbjct: 67 LNNGIGVMALRRAYG 81
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSH SG + R LQ LE + +V K+Q GR LT +GR+D+D+I
Sbjct: 90 PSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTKEGRKDMDKI 134
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/84 (46%), Positives = 50/84 (59%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
TVKDV ++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 321 YIRSPVGVKTVTKIFGGRKRNGVH 250
Y+R GV +T +FG NG H
Sbjct: 117 YVRGHWGVGNLTHMFGSVNDNGKH 140
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/82 (46%), Positives = 50/82 (60%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
TV DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 321 YIRSPVGVKTVTKIFGGRKRNG 256
YI PVG++ + +GGRK G
Sbjct: 63 YIDGPVGIERLRTYYGGRKNRG 84
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
P F ++ GSI RKALQ LEA +EKV GR++T +GR LD+I
Sbjct: 87 PERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
TVKDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 321 YIRSPVGVKTVTKIFGGRKRNGVHLHISAGHQAVLHARLCNRW 193
Y++ G+ T+ IFG K G ++ HQA H ++ RW
Sbjct: 69 YLKPHTGISTLKHIFGSNKDRG---NLRNKHQA-CHGKIL-RW 106
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 79.4 bits (187), Expect = 6e-14
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 321 YIRSPVGVKTVTKIFGGRKRNG 256
Y+ P+GV+ + +GG K G
Sbjct: 63 YVDGPLGVERMRSFYGGSKNRG 84
Score = 34.3 bits (75), Expect = 2.4
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -1
Query: 256 STPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 113
S P+ F + SGS+ RKALQ LEA L+ V D GR ++ G LD +
Sbjct: 85 SKPNAFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKVSPAGMAFLDSV 131
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = -2
Query: 507 SVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAA 337
++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR AA
Sbjct: 74 NLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAAA 133
Query: 336 ILRHIYIRSPVGVKTVTKIFGGRKRNG 256
+ RHIY+R VGV + K+ G K G
Sbjct: 134 VARHIYMRKTVGVGRLRKVHGSTKNRG 160
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 256 STPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 113
S P+H +SGS+ RK +QSLE + ++E ++ GGR +T G+RDLDRI
Sbjct: 161 SRPNHHVDASGSVDRKIIQSLEKIGVLEYDEEKGGRRITQAGQRDLDRI 209
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = -2
Query: 507 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 328
+ ++ D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILR
Sbjct: 25 NTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILR 84
Query: 327 HIYIRSPVGVKTVTKIFGGRKRNG 256
H+Y G+ + +++ RKR G
Sbjct: 85 HLYFHPDEGIGRLRRVYASRKRRG 108
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQG 134
P+H C +SG I R +Q LEA +EK +D GR L+ +G
Sbjct: 111 PNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGRRLSRRG 150
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = -2
Query: 489 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 310
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 309 PVGVKTVTKIFGGRKRNG 256
PVGV + +GGR+ G
Sbjct: 67 PVGVSRLRTYYGGRQDRG 84
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 72.9 bits (171), Expect = 6e-12
Identities = 37/82 (45%), Positives = 48/82 (58%)
Frame = -2
Query: 501 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 322
TV DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 321 YIRSPVGVKTVTKIFGGRKRNG 256
YI PVG++ + +GGRKR G
Sbjct: 61 YIDGPVGIERLRTFYGGRKRRG 82
Score = 41.9 bits (94), Expect = 0.012
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1
Query: 256 STPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
S P F + SG+I R AL LE L V+K ++G R++T GR LD++
Sbjct: 83 SKPPKFRKGSGAIVRNALHQLEQLGFVKKTREG-RVVTPMGRSFLDKV 129
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = -2
Query: 483 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH 208
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 212 PSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 68.9 bits (161), Expect = 9e-11
Identities = 30/92 (32%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = -2
Query: 498 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 319
+KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 318 IRSPVGVKTVTKIFGGRKRNGV---HLHISAG 232
I +GV + + F ++R GV H +++G
Sbjct: 110 IHPDIGVGFLRRQFSYKQRRGVAPNHTSLASG 141
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 68.9 bits (161), Expect = 9e-11
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
V+VK V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRK 61
Query: 324 IYIRSPVGVKTVTKIFGGR-KRNGVHLHISAGHQAV 220
+YI +G+ ++ +GG+ R H ++G +++
Sbjct: 62 LYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSI 97
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 328
V +V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 327 HIY-IRSPVGVKTVTKIFGGRKRNG 256
+Y P+G++T I+GGR+ G
Sbjct: 62 KLYKSPEPIGIETFRTIYGGRQNRG 86
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = -1
Query: 256 STPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 119
S P HF ++ GS+ RK LQ LE LV KV GR ++ GR LD
Sbjct: 87 SAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = -2
Query: 495 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 316
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 315 RSPVGVKTVTKIFGGRKR 262
+ + +G +
Sbjct: 74 HHDASLSGLAFHYGANMK 91
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = -2
Query: 498 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 319
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 318 IRSPVGVKTVTKIFGGRKRNG 256
+ P+G+ + K +GG K +G
Sbjct: 63 LHGPIGINELRKDYGGGKPSG 83
Score = 40.7 bits (91), Expect = 0.028
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -1
Query: 247 SHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
+H + G+I R A+ LE L +EKV+ GRI++ QG + LDR+
Sbjct: 87 AHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIVSKQGMQKLDRL 131
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/91 (30%), Positives = 51/91 (56%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VT+ DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR
Sbjct: 14 VTIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRK 71
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGVHLHISAG 232
+ P+G++ + +G +KR + G
Sbjct: 72 VAQNEPIGIERLATEYGSKKRGSNRYSVRPG 102
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 58.4 bits (135), Expect = 1e-07
Identities = 21/79 (26%), Positives = 48/79 (60%)
Frame = -2
Query: 498 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 319
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 318 IRSPVGVKTVTKIFGGRKR 262
I +G + + +I+ G+K+
Sbjct: 65 IYKKLGTRQLVRIYNGKKK 83
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 52.4 bits (120), Expect = 8e-06
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = -2
Query: 480 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 301
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 300 VKTVTKIFGGRKRNG 256
+ + +GG K G
Sbjct: 63 INGLRSEYGGGKPRG 77
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = -1
Query: 235 RSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
++ G+I R A+ LE L +EK+ GRI++ QG + LDR+
Sbjct: 85 KAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 34.7 bits (76), Expect = 1.8
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 280 DLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSS 459
DLG + + V + + GS++ +EP+ ++ S+LF L +H F
Sbjct: 80 DLGHGANPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGC 139
Query: 460 DSFNNLVLFNILYCDGSTR 516
S + L+L ++ Y + R
Sbjct: 140 QSSDELLLVHVFYSNSRHR 158
>UniRef50_Q4QBV6 Cluster: DNA primase small subunit, putative; n=6;
Trypanosomatidae|Rep: DNA primase small subunit,
putative - Leishmania major
Length = 451
Score = 34.3 bits (75), Expect = 2.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 360 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVHLHI 241
W ++ CAA + H +R G K + +F GR+ G+HL +
Sbjct: 190 WAWMSCAAHVLHTVLRDDFGFKYILPVFSGRR--GIHLWV 227
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 33.1 bits (72), Expect = 5.6
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALK 182
PSHF R S ++AR+ LQ+LE LK
Sbjct: 85 PSHFNRGSKTVARRVLQALEGLK 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,682,781
Number of Sequences: 1657284
Number of extensions: 9325007
Number of successful extensions: 22930
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 22243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22921
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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