Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30268.Seq
(625 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 147 1e-35
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 147 1e-35
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 147 1e-35
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 147 1e-35
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 147 1e-35
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 146 2e-35
AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p pro... 115 6e-26
AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB... 115 6e-26
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 147 bits (356), Expect = 1e-35
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH
Sbjct: 4 VTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGVH 250
+Y RSP GV ++TKI+GGRKRNGVH
Sbjct: 64 LYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 89 PSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 147 bits (356), Expect = 1e-35
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH
Sbjct: 4 VTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGVH 250
+Y RSP GV ++TKI+GGRKRNGVH
Sbjct: 64 LYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 89 PSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 147 bits (356), Expect = 1e-35
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH
Sbjct: 4 VTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGVH 250
+Y RSP GV ++TKI+GGRKRNGVH
Sbjct: 64 LYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 89 PSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 147 bits (356), Expect = 1e-35
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH
Sbjct: 4 VTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGVH 250
+Y RSP GV ++TKI+GGRKRNGVH
Sbjct: 64 LYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 89 PSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 147 bits (356), Expect = 1e-35
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH
Sbjct: 4 VTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGVH 250
+Y RSP GV ++TKI+GGRKRNGVH
Sbjct: 64 LYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 89 PSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 146 bits (355), Expect = 2e-35
Identities = 62/85 (72%), Positives = 75/85 (88%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVKD++Q + K VA LKKTGK+KVP+ MD++KTA+FKELAPYDPDWFYVRCA+ILRH
Sbjct: 4 VTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASILRH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGVH 250
+Y RSP GV ++TKI+GGRKRNGVH
Sbjct: 64 LYHRSPAGVGSITKIYGGRKRNGVH 88
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PSHFCR++ ARKALQ+LE +LVEK DGGR L++ G+RDLDRI
Sbjct: 89 PSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRI 134
>AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p
protein.
Length = 155
Score = 115 bits (276), Expect = 6e-26
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP D DWFY RCA+I+RH
Sbjct: 4 VTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV 253
+Y+RSP GV TK++ GRKRNGV
Sbjct: 64 LYLRSPAGVGAFTKVYSGRKRNGV 87
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PS CRSS RKALQ+LEA +VE+ DGGR LT QG+R+LDRI
Sbjct: 89 PSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRI 134
>AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB
protein.
Length = 155
Score = 115 bits (276), Expect = 6e-26
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = -2
Query: 504 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 325
VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP D DWFY RCA+I+RH
Sbjct: 4 VTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRH 63
Query: 324 IYIRSPVGVKTVTKIFGGRKRNGV 253
+Y+RSP GV TK++ GRKRNGV
Sbjct: 64 LYLRSPAGVGAFTKVYSGRKRNGV 87
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = -1
Query: 250 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 113
PS CRSS RKALQ+LEA +VE+ DGGR LT QG+R+LDRI
Sbjct: 89 PSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRI 134
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,561,708
Number of Sequences: 53049
Number of extensions: 472343
Number of successful extensions: 1141
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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