Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30264.Seq
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          25   2.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          25   2.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          25   2.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          25   2.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   3.4  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   7.8  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   7.8  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 635 KIFKFTQEPIARPSEFVRHALSQ 567
           +I +  +EP+A+PS+ V+  +S+
Sbjct: 79  QILRLLKEPVAKPSDMVKQEVSK 101


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 635 KIFKFTQEPIARPSEFVRHALSQ 567
           +I +  +EP+A+PS+ V+  +S+
Sbjct: 79  QILRLLKEPVAKPSDMVKQEVSK 101


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 635 KIFKFTQEPIARPSEFVRHALSQ 567
           +I +  +EP+A+PS+ V+  +S+
Sbjct: 79  QILRLLKEPVAKPSDMVKQEVSK 101


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 635 KIFKFTQEPIARPSEFVRHALSQ 567
           +I +  +EP+A+PS+ V+  +S+
Sbjct: 79  QILRLLKEPVAKPSDMVKQEVSK 101


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 550  HALELNCDSACLTNSEGRAIGSWVNLKI 633
            +AL +NC+   +  S G +IG W  +++
Sbjct: 1402 NALSVNCNGKVVHGSVGFSIGGWSYVEV 1429


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 550  HALELNCDSACLTNSEGRAIGSWVNLKI 633
            +AL +NC+   +  S G +IG W  +++
Sbjct: 1403 NALSVNCNGKVVHGSVGFSIGGWSYVEV 1430


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 535 IKDCTHALELNCDSACL 585
           +K C  A +L CDS C+
Sbjct: 111 VKFCQFAFDLKCDSVCV 127


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 608 IARPSEFVRHALSQFNSKACV 546
           + RP  ++   +SQF+S+ C+
Sbjct: 124 VGRPIYYLEMLISQFSSRGCI 144


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 608 IARPSEFVRHALSQFNSKACV 546
           + RP  ++   +SQF+S+ C+
Sbjct: 124 VGRPIYYLEMLISQFSSRGCI 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,693
Number of Sequences: 2352
Number of extensions: 15484
Number of successful extensions: 50
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)