Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30258.Seq
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.4  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.8  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 170 ILTMLVVSLSINITFIPGPLSSVILVMYILTACI 69
           IL  L  +      FI GP+  ++ ++Y L +C+
Sbjct: 281 ILAQLWATWDPQSPFIDGPVFVILTLLYSLNSCV 314


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 556 PRRNPASAPISLDXMGVLACVESETALPS 470
           P + P + PI  D +G L CV+    LP+
Sbjct: 184 PHQGPLT-PILYDHIGDLVCVDFYGPLPT 211


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 270 VFIRPTSENIALLSRELRDPKYGVYFIYFS 359
           +FI    +   L+++ ++ P Y + F Y S
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALKFEYRS 425


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 270 VFIRPTSENIALLSRELRDPKYGVYFIYFS 359
           +FI    +   L+++ ++ P Y + F Y S
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALKFEYRS 425


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 270 VFIRPTSENIALLSRELRDPKYGVYFIYFS 359
           +FI    +   L+++ ++ P Y + F Y S
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALKFEYRS 425


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 270 VFIRPTSENIALLSRELRDPKYGVYFIYFS 359
           +FI    +   L+++ ++ P Y + F Y S
Sbjct: 396 IFINDIVKTAKLMAKSMKSPTYALKFEYRS 425


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,458
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)