Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30255.Seq
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.22 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.87 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 152 YGSFQLFNKILLLM*RTGYCIYFHALLVCSLLHFSI 259
           Y +F LF   LLL+    Y  Y H L  C+ + F++
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTM 277


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 164  QLFNKILLLM*RTGYCIYFHALLVCSLLH 250
            +L  K +++M  +G  I+   + +CSL+H
Sbjct: 1151 KLVIKAIIIMILSGCIIFTEGIWICSLIH 1179


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 238 FIVAFFYYIFISTSSLAVCLDLNNSHYRR 324
           F VA  +  +    S  VC   + SH+R+
Sbjct: 10  FAVATLFAAYCKAESKVVCYYDSKSHFRQ 38


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 206 YCIYFHALLVCSLLHFSIT 262
           +C +  AL+ CS+  F+++
Sbjct: 43  FCTFVAALVYCSVTFFALS 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,193
Number of Sequences: 336
Number of extensions: 1805
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)