Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30254.Seq
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 120 3e-27
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 120 3e-27
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 120 3e-27
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 120 3e-27
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 120 3e-27
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 120 3e-27
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 120 3e-27
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 119 7e-27
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 89 8e-18
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 29 7.2
AF086762-1|AAF28400.1| 1111|Homo sapiens C11orf9 protein. 29 7.2
AC004770-4|AAC23395.1| 482|Homo sapiens BC269730_4 protein. 29 7.2
AB023171-1|BAA76798.2| 1183|Homo sapiens KIAA0954 protein protein. 29 7.2
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 120 bits (289), Expect = 3e-27
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 120 bits (289), Expect = 3e-27
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 120 bits (289), Expect = 3e-27
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 120 bits (289), Expect = 3e-27
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 120 bits (289), Expect = 3e-27
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 70.5 bits (165), Expect = 3e-12
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPR DV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 120 bits (289), Expect = 3e-27
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 120 bits (289), Expect = 3e-27
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 119 bits (286), Expect = 7e-27
Identities = 57/72 (79%), Positives = 61/72 (84%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG QVLI PCSKVIV+FLT+MMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 61 IVVNLTGRLNKC 72
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 74 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 89.0 bits (211), Expect = 8e-18
Identities = 47/72 (65%), Positives = 51/72 (70%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKFLTVMMKXGYIGEFEIVDDHRAGK 291
MVRMNVL+ ALK A RG + L+ LTVMMK GYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59
Query: 290 IVVNLTGRLNKC 255
IVVNLTGRLNKC
Sbjct: 60 IVVNLTGRLNKC 71
Score = 73.7 bits (173), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -1
Query: 252 VISPRFDVPINDIERW-TNLLPSRQFGYLXLTTSGGXMDHEEARR 121
VISPRFDV + D+E+W NLLPSRQFG++ LTTS G MDHEEARR
Sbjct: 73 VISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 117
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 29.5 bits (63), Expect = 7.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 470 MVRMNVLSXALKXXXXAXXRGXXQVLIXPCSKVIVKF 360
MV MNVL+ ALK RG QVL C ++ F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
>AF086762-1|AAF28400.1| 1111|Homo sapiens C11orf9 protein.
Length = 1111
Score = 29.5 bits (63), Expect = 7.2
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 264 KQVCVISPRFDVPINDIERWTNLLPS-RQFGYLXLTTSGGXMDH 136
K++C ++ + I+++ERW++ L R+ L T S G H
Sbjct: 674 KELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGSSGAFSH 717
>AC004770-4|AAC23395.1| 482|Homo sapiens BC269730_4 protein.
Length = 482
Score = 29.5 bits (63), Expect = 7.2
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 264 KQVCVISPRFDVPINDIERWTNLLPS-RQFGYLXLTTSGGXMDH 136
K++C ++ + I+++ERW++ L R+ L T S G H
Sbjct: 327 KELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGSSGAFSH 370
>AB023171-1|BAA76798.2| 1183|Homo sapiens KIAA0954 protein protein.
Length = 1183
Score = 29.5 bits (63), Expect = 7.2
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 264 KQVCVISPRFDVPINDIERWTNLLPS-RQFGYLXLTTSGGXMDH 136
K++C ++ + I+++ERW++ L R+ L T S G H
Sbjct: 715 KELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGSSGAFSH 758
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,031,635
Number of Sequences: 237096
Number of extensions: 774559
Number of successful extensions: 987
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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