Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30252.Seq
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138884-1|ABA86490.1|  956|Drosophila melanogaster CG5669 protein.    29   5.4  
AY089533-1|AAL90271.1|  968|Drosophila melanogaster LD04007p pro...    29   5.4  
AE014297-3502|AAF56261.1|  968|Drosophila melanogaster CG5669-PA...    29   5.4  

>DQ138884-1|ABA86490.1|  956|Drosophila melanogaster CG5669 protein.
          Length = 956

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +3

Query: 345 ELHANFK-VHVCTLSDIEY*NRRKY*NTSYHLIYLTWHGTST--VCEWCWCGMEF 500
           E H++ K  H+C ++       + Y  TS+   +L WH      VC W +CG  F
Sbjct: 725 EKHSDKKRQHICHITGCH----KVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRF 775


>AY089533-1|AAL90271.1|  968|Drosophila melanogaster LD04007p
           protein.
          Length = 968

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +3

Query: 345 ELHANFK-VHVCTLSDIEY*NRRKY*NTSYHLIYLTWHGTST--VCEWCWCGMEF 500
           E H++ K  H+C ++       + Y  TS+   +L WH      VC W +CG  F
Sbjct: 731 EKHSDKKRQHICHITGCH----KVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRF 781


>AE014297-3502|AAF56261.1|  968|Drosophila melanogaster CG5669-PA
           protein.
          Length = 968

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +3

Query: 345 ELHANFK-VHVCTLSDIEY*NRRKY*NTSYHLIYLTWHGTST--VCEWCWCGMEF 500
           E H++ K  H+C ++       + Y  TS+   +L WH      VC W +CG  F
Sbjct: 731 EKHSDKKRQHICHITGCH----KVYGKTSHLRAHLRWHTGERPFVCSWAFCGKRF 781


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,492,217
Number of Sequences: 53049
Number of extensions: 677371
Number of successful extensions: 1324
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)