Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30251.Seq
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...   114   4e-26
Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    34   0.091
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    34   0.091
Z75551-3|CAA99936.2|  547|Caenorhabditis elegans Hypothetical pr...    34   0.091
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       29   3.4  
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla...    29   3.4  
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ...    29   3.4  

>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score =  114 bits (275), Expect = 4e-26
 Identities = 53/112 (47%), Positives = 78/112 (69%)
 Frame = +3

Query: 255 FSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 434
           FSDKEKKL+K MKF   L Q++D+++  +DV+KPWIT ++ +IL MEDDVV+EY+ +Q++
Sbjct: 17  FSDKEKKLLKTMKFEPQLEQKIDLNRCNMDVIKPWITARVNDILGMEDDVVVEYILSQID 76

Query: 435 EKFPCPKKMQINLTGFLNGKEXHAFHGRVMGAVAERAGPVENGIPRILYSSR 590
           +K   PK +QIN+TGFLN +    F G +   + E A   E+GIP  L + +
Sbjct: 77  DKNLNPKLLQINVTGFLNARRAREFVGDLWNLLIE-ANASEDGIPASLVNQK 127


>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 33.9 bits (74), Expect = 0.091
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +3

Query: 342 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEK 440
           D ++PW+ +K+T+ L  ED    +++ +Q+E++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQ 664


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 33.9 bits (74), Expect = 0.091
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +3

Query: 342 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEK 440
           D ++PW+ +K+T+ L  ED    +++ +Q+E++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQ 664


>Z75551-3|CAA99936.2|  547|Caenorhabditis elegans Hypothetical
           protein W04D2.6b protein.
          Length = 547

 Score = 33.9 bits (74), Expect = 0.091
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +3

Query: 342 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEK 440
           D ++PW+ +K+T+ L  ED    +++ +Q+E++
Sbjct: 474 DRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQ 506


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 324 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 434
           +S +K DVL P I  +   I+N+E DV +E +T   E
Sbjct: 138 VSYIKRDVLFPQIMPRDMIIVNVEIDVAVETITTTNE 174


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 324 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 434
           +S +K DVL P I  +   I+N+E DV +E +T   E
Sbjct: 138 VSYIKRDVLFPQIMPRDMIIVNVEIDVAVETITTTNE 174


>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
            protein 8 protein.
          Length = 1206

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +3

Query: 345  VLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGK 494
            V+KP I Q   ++LNM+   +I+   N   E  P  +++++N+  +LN K
Sbjct: 867  VVKPTIPQN--KVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIK 914


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 599 FLSSAGVKDSGYTVFNWACALSNSSHNSPMKGVRF 495
           FL   G K     V +W+  +S S H+ P+ GVRF
Sbjct: 437 FLGIGGQKVQVLHVKSWSEVVSLSDHSGPVTGVRF 471


>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1152

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +3

Query: 345 VLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGK 494
           V+KP I Q   ++LNM+   +I+   N   E  P  +++++N+  +LN K
Sbjct: 813 VVKPTIPQN--KVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIK 860


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,851,826
Number of Sequences: 27780
Number of extensions: 287050
Number of successful extensions: 785
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)