Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30218.Seq
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 136 1e-31
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 136 1e-31
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 136 1e-31
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 136 1e-31
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 136 1e-31
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 81 4e-15
BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology dom... 31 5.9
AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein. 31 5.9
AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens ... 31 5.9
AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein. 31 5.9
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 136 bits (328), Expect = 1e-31
Identities = 59/77 (76%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VDIRVTVKGGGHVAQVY 254
VDIRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 125 bits (302), Expect = 2e-28
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 136 bits (328), Expect = 1e-31
Identities = 59/77 (76%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VDIRVTVKGGGHVAQVY 254
VDIRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 136 bits (328), Expect = 1e-31
Identities = 59/77 (76%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VDIRVTVKGGGHVAQVY 254
VDIRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 125 bits (302), Expect = 2e-28
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 136 bits (328), Expect = 1e-31
Identities = 59/77 (76%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VDIRVTVKGGGHVAQVY 254
VDIRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 125 bits (302), Expect = 2e-28
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 136 bits (328), Expect = 1e-31
Identities = 59/77 (76%), Positives = 73/77 (94%)
Frame = +3
Query: 24 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 203
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 204 VDIRVTVKGGGHVAQVY 254
VDIRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 125 bits (302), Expect = 2e-28
Identities = 57/63 (90%), Positives = 62/63 (98%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQK 436
IRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 437 SYR 445
SYR
Sbjct: 144 SYR 146
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 81.0 bits (191), Expect = 4e-15
Identities = 49/145 (33%), Positives = 68/145 (46%)
Frame = +3
Query: 27 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 206
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 207 DIRVTVKGGGHVAQVYLSDKLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLTXXX 386
DI V VKG GHV Q+Y + + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 387 XXXXXXXXXXXXXDTRNLTVKPSRK 461
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
Score = 36.3 bits (80), Expect = 0.12
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 257 IRQAISKALIAFYQKYVDEASKKEIKDILVQ 349
+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 95 VLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC064361-1|AAH64361.1| 1056|Homo sapiens pleckstrin homology domain
containing, family M (with RUN domain) member 1 protein.
Length = 1056
Score = 30.7 bits (66), Expect = 5.9
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = -2
Query: 311 RLHISGRRRSEPLK*LV**VNLCYMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQ 144
R+H+ GRRR E LK L + LC + +NHR + L E RF LQQ
Sbjct: 914 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 967
>AK074103-1|BAB84929.1| 628|Homo sapiens FLJ00174 protein protein.
Length = 628
Score = 30.7 bits (66), Expect = 5.9
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = -2
Query: 311 RLHISGRRRSEPLK*LV**VNLCYMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQ 144
R+H+ GRRR E LK L + LC + +NHR + L E RF LQQ
Sbjct: 486 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 539
>AJ002220-1|CAB91652.1| 926|Homo sapiens protein ( Homo sapiens B2
gene partial cDNA, clone B2E. ).
Length = 926
Score = 30.7 bits (66), Expect = 5.9
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = -2
Query: 311 RLHISGRRRSEPLK*LV**VNLCYMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQ 144
R+H+ GRRR E LK L + LC + +NHR + L E RF LQQ
Sbjct: 784 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 837
>AB002354-1|BAA20813.2| 1058|Homo sapiens KIAA0356 protein protein.
Length = 1058
Score = 30.7 bits (66), Expect = 5.9
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = -2
Query: 311 RLHISGRRRSEPLK*LV**VNLCYMTTTLDCHSDVNHREFFLAEQKDRFLKFVLQQ 144
R+H+ GRRR E LK L + LC + +NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,997,953
Number of Sequences: 237096
Number of extensions: 2684459
Number of successful extensions: 5293
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5281
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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