Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30217.Seq
(767 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB79FD Cluster: PREDICTED: similar to WD repeat ... 52 2e-05
UniRef50_A7RGM3 Cluster: Predicted protein; n=1; Nematostella ve... 46 8e-04
UniRef50_Q8SXT6 Cluster: RE25260p; n=3; Sophophora|Rep: RE25260p... 43 0.007
UniRef50_Q15061 Cluster: WD repeat-containing protein 43; n=33; ... 41 0.029
UniRef50_UPI0000F2B6D1 Cluster: PREDICTED: similar to hCG16536,;... 38 0.21
UniRef50_A7S3I9 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.84
UniRef50_Q7QE16 Cluster: ENSANGP00000017414; n=2; Culicidae|Rep:... 36 1.1
UniRef50_UPI00006CFD9E Cluster: conserved hypothetical protein; ... 36 1.5
UniRef50_A0B6J3 Cluster: Glycosyl transferase, group 1; n=1; Met... 35 1.9
UniRef50_Q4SQW6 Cluster: Chromosome 11 SCAF14528, whole genome s... 35 2.6
UniRef50_Q4C9P2 Cluster: G-protein beta WD-40 repeat; n=2; Chroo... 35 2.6
UniRef50_Q4H3S8 Cluster: Cockayne syndrome 1 homolog; n=2; Ciona... 35 2.6
UniRef50_A7RIX9 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.6
UniRef50_A0E258 Cluster: Chromosome undetermined scaffold_74, wh... 35 2.6
UniRef50_Q9VFS0 Cluster: CG9345-PA; n=1; Drosophila melanogaster... 34 3.4
UniRef50_Q9BL05 Cluster: Rab connectin related protein 2; n=2; C... 34 3.4
UniRef50_A2R2L9 Cluster: Contig An14c0040, complete genome. prec... 34 3.4
UniRef50_A2QT36 Cluster: Function: seems to be a general transcr... 34 3.4
UniRef50_P74442 Cluster: Uncharacterized WD repeat-containing pr... 34 3.4
UniRef50_UPI00015B479B Cluster: PREDICTED: similar to CG4562-PA;... 33 5.9
UniRef50_Q7RQJ1 Cluster: Putative uncharacterized protein PY0110... 33 5.9
UniRef50_Q8TMS3 Cluster: WD-domain containing protein; n=1; Meth... 33 5.9
UniRef50_Q66JB8 Cluster: Tbl2 protein (Transducin (Beta)-like 2)... 33 7.8
UniRef50_A4MJW9 Cluster: WD-40 repeat protein; n=1; Petrotoga mo... 33 7.8
UniRef50_Q4YTM6 Cluster: RNA binding protein, putative; n=2; Pla... 33 7.8
UniRef50_Q59WS9 Cluster: Potential activator of anaphase promoti... 33 7.8
UniRef50_A1CGW5 Cluster: Ras guanine-nucleotide exchange protein... 33 7.8
UniRef50_Q6MTR3 Cluster: Aspartyl-tRNA synthetase; n=2; Mollicut... 33 7.8
>UniRef50_UPI0000DB79FD Cluster: PREDICTED: similar to WD repeat
domain 43, like; n=2; Apocrita|Rep: PREDICTED: similar
to WD repeat domain 43, like - Apis mellifera
Length = 624
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 2 AEAMFSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTC 145
A FS DG+Y++ DG+LKIW T T LKQEY + HL+S P C
Sbjct: 5 ANYAFSSDGEYFAHCGNDGKLKIWDTNTGRLKQEYVSNFHLSS--PCC 50
Score = 40.3 bits (90), Expect = 0.051
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 256 TNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIEDGSVK 435
TNGK+ +Y + + +V S VTA WS G + + D + +WN+++ VK
Sbjct: 92 TNGKITLYDTTTS---SVTAQLDGHSGSVTAATWSENVGFITASDDHHIIQWNLQENGVK 148
>UniRef50_A7RGM3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 686
Score = 46.4 bits (105), Expect = 8e-04
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDLHLTST 133
F +G++ + +T DGRLK+W LK +YTP HL++T
Sbjct: 33 FDNNGRFLALLTPDGRLKVWDCTNGSLKNQYTPSSHLSTT 72
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 256 TNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIEDGSVK 435
T+G +L+YS+S ++ + + H S+KV ++WSR LYSC+ D + EW E K
Sbjct: 114 TSGDILLYSLSAGEV-HKKLEGGH-SSKVNDVEWSRNGELYSCSSDKYIVEWCTEKAEHK 171
Query: 436 QTY 444
+
Sbjct: 172 SKW 174
>UniRef50_Q8SXT6 Cluster: RE25260p; n=3; Sophophora|Rep: RE25260p -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +2
Query: 26 GKYYSTITKDGRLKIWGTETNVLKQEYTPDLHLTST 133
G+ ++++ + G L+IW TETN L QE+TP+L L+ +
Sbjct: 16 GQLFASVDESGVLRIWNTETNTLYQEFTPNLQLSGS 51
>UniRef50_Q15061 Cluster: WD repeat-containing protein 43; n=33;
Euteleostomi|Rep: WD repeat-containing protein 43 - Homo
sapiens (Human)
Length = 677
Score = 41.1 bits (92), Expect = 0.029
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 32 YYSTITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTC 145
Y++ + DG L++W T N L QEY P HL+ T TC
Sbjct: 28 YFALASTDGHLRVWETANNRLHQEYVPSAHLSGTC-TC 64
Score = 40.3 bits (90), Expect = 0.051
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 GKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVK 435
G +L+YS + ++ + + H + +V + W + G LYSC+ D + EWN++ VK
Sbjct: 104 GSILLYSTVKGELHSKLISGGHDN-RVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVK 161
>UniRef50_UPI0000F2B6D1 Cluster: PREDICTED: similar to hCG16536,;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG16536, - Monodelphis domestica
Length = 541
Score = 38.3 bits (85), Expect = 0.21
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 14 FSEDGKYYSTIT-KDGRLKIWGTETNVLKQEYTPDLHLTSTLPTC 145
FS G++Y ++ DG L++W T ++ L Q++ P HL++T TC
Sbjct: 21 FSPRGQHYFSLAGPDGHLRVWETASSRLHQDFVPSAHLSATC-TC 64
>UniRef50_A7S3I9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 700
Score = 36.3 bits (80), Expect = 0.84
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 322 KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQTYNISIENNT 468
K + + AL + + G LYS +DS + WN+ + +K Y +S+E++T
Sbjct: 27 KRHRSGINALQYDKSNGRLYSAGRDSIIRCWNVRNERIKDPYMVSLEHHT 76
>UniRef50_Q7QE16 Cluster: ENSANGP00000017414; n=2; Culicidae|Rep:
ENSANGP00000017414 - Anopheles gambiae str. PEST
Length = 613
Score = 35.9 bits (79), Expect = 1.1
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDLHL 124
FS GKY + I++ G+ + ET+ + Q YTP++HL
Sbjct: 8 FSPCGKYCAYISQQGKFVVHDVETSDIHQVYTPNMHL 44
>UniRef50_UPI00006CFD9E Cluster: conserved hypothetical protein; n=1;
Tetrahymena thermophila SB210|Rep: conserved hypothetical
protein - Tetrahymena thermophila SB210
Length = 2254
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 2 AEAMFSEDGKYYSTITKDGRLKIWGTETN 88
A FS+DGKY+ST ++D KIW + N
Sbjct: 2055 ASMSFSDDGKYFSTGSEDNTCKIWDSNNN 2083
>UniRef50_A0B6J3 Cluster: Glycosyl transferase, group 1; n=1;
Methanosaeta thermophila PT|Rep: Glycosyl transferase,
group 1 - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 363
Score = 35.1 bits (77), Expect = 1.9
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 232 VPMHSIRHTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEW 411
VP+ ++RH + +I+ PA A ALD SRK G C + + Y+W
Sbjct: 290 VPVVAVRHRMNAACDLLTPETGVISELSPASMADAIQAALDLSRKAG-QKCREIASRYDW 348
Query: 412 NIEDGSVKQTY 444
++ G +++ Y
Sbjct: 349 DVICGEIERVY 359
>UniRef50_Q4SQW6 Cluster: Chromosome 11 SCAF14528, whole genome
shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 11
SCAF14528, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 685
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 322 KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDG 426
K S KV ++ WS G L SC D VYEWN + G
Sbjct: 546 KGHSGKVRSVAWSPDDGGLVSCGMDGAVYEWNTQSG 581
>UniRef50_Q4C9P2 Cluster: G-protein beta WD-40 repeat; n=2;
Chroococcales|Rep: G-protein beta WD-40 repeat -
Crocosphaera watsonii
Length = 1173
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWGTETNV---LKQEYTPDLHLTSTL 136
+ FS DG+Y +T ++DG K+W ++ N+ L+++ TP ++ +L
Sbjct: 688 DVAFSPDGQYIATASRDGTAKLWDSQGNLRKTLQEKATPLFSISFSL 734
>UniRef50_Q4H3S8 Cluster: Cockayne syndrome 1 homolog; n=2; Ciona
intestinalis|Rep: Cockayne syndrome 1 homolog - Ciona
intestinalis (Transparent sea squirt)
Length = 403
Score = 34.7 bits (76), Expect = 2.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 11 MFSEDGKYYSTITKDGRLKIWGTET 85
+FSEDG+Y T D RL +W T+T
Sbjct: 258 LFSEDGRYLLTFATDQRLHLWNTDT 282
>UniRef50_A7RIX9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 276
Score = 34.7 bits (76), Expect = 2.6
Identities = 30/93 (32%), Positives = 43/93 (46%)
Frame = -1
Query: 524 FLVLIGGIIFMAFILLPCFVLFSIEIL*VCLTEPSSMFHS*TLLSLVQLYKPYFLLQSRA 345
F+ LI ++ ILL C + + IL VCL + L++ V + L+
Sbjct: 78 FVCLIAQVVV---ILLLCLIAQVVVILFVCLIAQVVVIVFVYLIAQVVVILFVCLIAQVV 134
Query: 344 VTLALKCLAGTQTFIIFA*LIEYINSLPFVCLI 246
VTL L CL I+ LI + +PFVCLI
Sbjct: 135 VTL-LVCLIAQVVVILLVCLIAQVVVIPFVCLI 166
>UniRef50_A0E258 Cluster: Chromosome undetermined scaffold_74, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_74,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 425
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 343 TALDWSRKYGLYSCTKDSRVYEWNIEDGSVKQTYNISIENNTKQGSNI 486
TALDWS++Y L S KD ++ W+I D + + + SI + ++ +NI
Sbjct: 177 TALDWSQEYKLGSGGKDCKILLWDINDYQTRLSTS-SIFTSKRELNNI 223
>UniRef50_Q9VFS0 Cluster: CG9345-PA; n=1; Drosophila
melanogaster|Rep: CG9345-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 34.3 bits (75), Expect = 3.4
Identities = 23/95 (24%), Positives = 41/95 (43%)
Frame = +1
Query: 121 LNIHPPYLPYSGQTRQSISFELKREPKQFKCEYKRK*VPMHSIRHTNGKLLIYSISQAKI 300
L+ P L + T QSI +R PK+ KC+ + V + R + +Y + ++
Sbjct: 124 LSYMPGLLRCTTATGQSI-LSFRRTPKEHKCQSQY--VLVSDERRNSLDRQVYDRNFERL 180
Query: 301 INVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVY 405
IN++ P W R G++ D+ +Y
Sbjct: 181 INLYTPVPELEYPTITRVWDRFQGMFDGLSDALIY 215
>UniRef50_Q9BL05 Cluster: Rab connectin related protein 2; n=2;
Caenorhabditis|Rep: Rab connectin related protein 2 -
Caenorhabditis elegans
Length = 1335
Score = 34.3 bits (75), Expect = 3.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 AEAMFSEDGKYYSTI-TKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTVDKPVSQSV 178
A FSEDGKY +T +DG++ + T + L L LT + P PTV P + S
Sbjct: 1249 AAVAFSEDGKYLATYGAEDGKINFFQTSQSFLGMGQA-QLKLTKSQP-APTVSVPTTPSG 1306
Query: 179 SNLK 190
++ +
Sbjct: 1307 TSFR 1310
>UniRef50_A2R2L9 Cluster: Contig An14c0040, complete genome.
precursor; n=7; Pezizomycotina|Rep: Contig An14c0040,
complete genome. precursor - Aspergillus niger
Length = 438
Score = 34.3 bits (75), Expect = 3.4
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 20 EDGK-YYSTI--TKDGRLKIWGTETNVLKQEYTPDLHLTSTLPT 142
E+GK + TI TKDG LK WG++ +E P H++S PT
Sbjct: 268 EEGKPFIGTIPPTKDGELKWWGSKIFTNTREVLPGRHISSPPPT 311
>UniRef50_A2QT36 Cluster: Function: seems to be a general
transcription factor; n=1; Aspergillus niger|Rep:
Function: seems to be a general transcription factor -
Aspergillus niger
Length = 1510
Score = 34.3 bits (75), Expect = 3.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDLHLTSTL 136
FS DG+ ++ KD +KIW T L+ DLH+ S +
Sbjct: 1078 FSADGRRLASGAKDKTVKIWDVATGALQDTIQTDLHIESAV 1118
>UniRef50_P74442 Cluster: Uncharacterized WD repeat-containing
protein slr0143; n=3; Synechocystis|Rep: Uncharacterized
WD repeat-containing protein slr0143 - Synechocystis sp.
(strain PCC 6803)
Length = 1191
Score = 34.3 bits (75), Expect = 3.4
Identities = 11/38 (28%), Positives = 26/38 (68%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDL 118
+A FS DG+ ++ +DG++++W + N+++Q P++
Sbjct: 689 DAQFSPDGQTLVSVCRDGQIRLWDLDGNLIRQFGLPEV 726
>UniRef50_UPI00015B479B Cluster: PREDICTED: similar to CG4562-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG4562-PA - Nasonia vitripennis
Length = 1304
Score = 33.5 bits (73), Expect = 5.9
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -3
Query: 633 RIAVCEVLYPKLLIKSHLYCEASKD*ADMMQLLSTGISCADW-WYNFYGVYIAPL 472
RIA C ++Y K+L S + E M+ LLS ++ D+ ++ + ++IAP+
Sbjct: 167 RIACCSLIYRKILRVSKVAAEGETSIGQMINLLSNDVNRLDYSVFSLHYIWIAPI 221
>UniRef50_Q7RQJ1 Cluster: Putative uncharacterized protein PY01106;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01106 - Plasmodium yoelii yoelii
Length = 1176
Score = 33.5 bits (73), Expect = 5.9
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +1
Query: 244 SIRHTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNI 417
++ + NG + ++ I Q KI++ + + H S +T L +++ L SC+KD+ + W+I
Sbjct: 88 AVGYMNGSIRLFDIFQNKILSTF--SGHTSG-ITKLKFNKGNYLCSCSKDTNIILWDI 142
>UniRef50_Q8TMS3 Cluster: WD-domain containing protein; n=1;
Methanosarcina acetivorans|Rep: WD-domain containing
protein - Methanosarcina acetivorans
Length = 1051
Score = 33.5 bits (73), Expect = 5.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWGTET 85
+A+F+ DGKY +T ++D ++W T T
Sbjct: 735 KAVFNRDGKYVATASQDNTARVWNTST 761
>UniRef50_Q66JB8 Cluster: Tbl2 protein (Transducin (Beta)-like 2);
n=9; Deuterostomia|Rep: Tbl2 protein (Transducin
(Beta)-like 2) - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 436
Score = 33.1 bits (72), Expect = 7.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQE 103
FS D + +T++KDG K+W T+ KQ+
Sbjct: 279 FSNDSRRMATVSKDGTWKLWDTDVEYKKQQ 308
>UniRef50_A4MJW9 Cluster: WD-40 repeat protein; n=1; Petrotoga
mobilis SJ95|Rep: WD-40 repeat protein - Petrotoga
mobilis SJ95
Length = 849
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 331 SAKVTALDWSRKYGLYSC-TKDSRVYEWNIEDGSVKQTYNIS 453
+A + A++WS + T D VY WN ++G+++ T NIS
Sbjct: 572 TAPIKAIEWSPDDNYVATGTTDGNVYIWNSKNGNLESTMNIS 613
>UniRef50_Q4YTM6 Cluster: RNA binding protein, putative; n=2;
Plasmodium (Vinckeia)|Rep: RNA binding protein, putative
- Plasmodium berghei
Length = 218
Score = 33.1 bits (72), Expect = 7.8
Identities = 23/86 (26%), Positives = 48/86 (55%)
Frame = +1
Query: 244 SIRHTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIED 423
++ + NG + ++ I Q KI++ + + H SA + L +++ L SC+KD+ + W+I +
Sbjct: 29 AVGYMNGSIRLFDIFQNKILSTF--SGHTSA-ICKLKFNKGNYLCSCSKDTNIILWDIVN 85
Query: 424 GSVKQTYNISIENNTKQGSNINAIKI 501
K Y +E +T ++I ++I
Sbjct: 86 D--KGMY--KLEGHTNAVNDIEFLEI 107
>UniRef50_Q59WS9 Cluster: Potential activator of anaphase promoting
complex; n=4; Saccharomycetales|Rep: Potential activator
of anaphase promoting complex - Candida albicans (Yeast)
Length = 699
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDLHLT 127
+S+DG Y S DG ++IW E+N + D HLT
Sbjct: 389 WSQDGSYISIGKDDGLIEIWDIESNTKLRTLNCDNHLT 426
>UniRef50_A1CGW5 Cluster: Ras guanine-nucleotide exchange protein,
putative; n=3; Eurotiomycetidae|Rep: Ras
guanine-nucleotide exchange protein, putative -
Aspergillus clavatus
Length = 1187
Score = 33.1 bits (72), Expect = 7.8
Identities = 21/79 (26%), Positives = 30/79 (37%)
Frame = +1
Query: 73 GYGDQRTQTGIHT*SSLNIHPPYLPYSGQTRQSISFELKREPKQFKCEYKRK*VPMHSIR 252
G G + T +L + PP PYS + Q S E +P+ Y R P H
Sbjct: 26 GTGHSSSNRCYSTQHNLQMSPPLTPYSATSNQDDSMERSDQPRAVFHNYLRAFYPFHQPG 85
Query: 253 HTNGKLLIYSISQAKIINV 309
+ + + Q II V
Sbjct: 86 DVSPATITLPLEQGDIILV 104
>UniRef50_Q6MTR3 Cluster: Aspartyl-tRNA synthetase; n=2;
Mollicutes|Rep: Aspartyl-tRNA synthetase - Mycoplasma
mycoides subsp. mycoides SC
Length = 574
Score = 33.1 bits (72), Expect = 7.8
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +1
Query: 253 HTNGKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIEDGSV 432
HT G+L I +I Q I+ WV + +D +YG+ D + + +V
Sbjct: 5 HTCGELTINNIDQEVILQGWVKKIRKLGAMVFIDLKDRYGITQLVVDQQHIDL---INNV 61
Query: 433 KQTYNISIENNTKQGSNIN 489
K Y I I+ N + +IN
Sbjct: 62 KNEYVIEIKGNVVKRKSIN 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,844,629
Number of Sequences: 1657284
Number of extensions: 14714400
Number of successful extensions: 38021
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 34913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37989
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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