Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30217.Seq
(767 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26488-1|BAA05499.1| 686|Homo sapiens KIAA0007 protein. 41 0.004
EF011613-1|ABK41103.1| 513|Homo sapiens CDW3/SMU1 protein. 32 2.0
BC110654-1|AAI10655.1| 513|Homo sapiens smu-1 suppressor of mec... 32 2.0
BC002876-1|AAH02876.1| 513|Homo sapiens smu-1 suppressor of mec... 32 2.0
AL162590-6|CAI15554.1| 513|Homo sapiens smu-1 suppressor of mec... 32 2.0
AK001667-1|BAA91822.1| 513|Homo sapiens protein ( Homo sapiens ... 32 2.0
Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein. 31 3.4
BC113614-1|AAI13615.1| 1508|Homo sapiens gem (nuclear organelle)... 31 3.4
BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2... 31 3.4
BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2... 31 3.4
BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2... 31 3.4
BC036894-1|AAH36894.1| 746|Homo sapiens GEMIN5 protein protein. 31 3.4
AY063750-1|AAL38980.1| 1508|Homo sapiens WD repeat protein Gemin... 31 3.4
AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2... 31 3.4
AK074066-1|BAB84892.1| 1512|Homo sapiens FLJ00137 protein protein. 31 3.4
AK022748-1|BAB14222.1| 741|Homo sapiens protein ( Homo sapiens ... 31 3.4
AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein. 31 3.4
AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2... 31 3.4
BC088354-1|AAH88354.1| 326|Homo sapiens G protein beta subunit-... 31 4.5
BC052292-1|AAH52292.1| 326|Homo sapiens GBL protein protein. 31 4.5
BC017119-1|AAH17119.1| 326|Homo sapiens G protein beta subunit-... 31 4.5
BC001313-1|AAH01313.1| 326|Homo sapiens G protein beta subunit-... 31 4.5
AY223837-1|AAO73410.1| 260|Homo sapiens LST8 protein. 31 4.5
AL121990-7|CAI22015.1| 589|Homo sapiens TAF5-like RNA polymeras... 31 4.5
AJ009770-1|CAA08816.1| 260|Homo sapiens putative transcription ... 31 4.5
AF195883-1|AAF04308.1| 230|Homo sapiens G protein beta subunit ... 31 4.5
AF069736-1|AAC39906.1| 589|Homo sapiens PCAF associated factor ... 31 4.5
>D26488-1|BAA05499.1| 686|Homo sapiens KIAA0007 protein.
Length = 686
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 32 YYSTITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTC 145
Y++ + DG L++W T N L QEY P HL+ T TC
Sbjct: 37 YFALASTDGHLRVWETANNRLHQEYVPSAHLSGTC-TC 73
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 GKLLIYSISQAKIINVWVPAKHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVK 435
G +L+YS + ++ + + H + +V + W + G LYSC+ D + EWN++ VK
Sbjct: 113 GSILLYSTVKGELHSKLISGGHDN-RVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVK 170
>EF011613-1|ABK41103.1| 513|Homo sapiens CDW3/SMU1 protein.
Length = 513
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWGTET 85
EA F++DG Y + + DG +KIW +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>BC110654-1|AAI10655.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWGTET 85
EA F++DG Y + + DG +KIW +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>BC002876-1|AAH02876.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWGTET 85
EA F++DG Y + + DG +KIW +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>AL162590-6|CAI15554.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWGTET 85
EA F++DG Y + + DG +KIW +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>AK001667-1|BAA91822.1| 513|Homo sapiens protein ( Homo sapiens
cDNA FLJ10805 fis, clone NT2RP4000839, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 513
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 5 EAMFSEDGKYYSTITKDGRLKIWGTET 85
EA F++DG Y + + DG +KIW +T
Sbjct: 354 EATFTQDGHYIISASSDGTVKIWNMKT 380
>Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein.
Length = 370
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 310 WVPA---KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQT 441
WV A K + +T +DW+ K + +C D Y W+ +DG K T
Sbjct: 42 WVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPT 89
>BC113614-1|AAI13615.1| 1508|Homo sapiens gem (nuclear organelle)
associated protein 5 protein.
Length = 1508
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 38 STITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTV 154
+T + DG +KIW ET + E+ H STL P V
Sbjct: 83 ATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPRV 121
>BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 310 WVPA---KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQT 441
WV A K + +T +DW+ K + +C D Y W+ +DG K T
Sbjct: 42 WVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPT 89
>BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 310 WVPA---KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQT 441
WV A K + +T +DW+ K + +C D Y W+ +DG K T
Sbjct: 42 WVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPT 89
>BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 310 WVPA---KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQT 441
WV A K + +T +DW+ K + +C D Y W+ +DG K T
Sbjct: 42 WVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPT 89
>BC036894-1|AAH36894.1| 746|Homo sapiens GEMIN5 protein protein.
Length = 746
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 38 STITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTV 154
+T + DG +KIW ET + E+ H STL P V
Sbjct: 83 ATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPRV 121
>AY063750-1|AAL38980.1| 1508|Homo sapiens WD repeat protein Gemin5
protein.
Length = 1508
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 38 STITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTV 154
+T + DG +KIW ET + E+ H STL P V
Sbjct: 83 ATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPRV 121
>AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 365
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 310 WVPA---KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQT 441
WV A K + +T +DW+ K + +C D Y W+ +DG K T
Sbjct: 37 WVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPT 84
>AK074066-1|BAB84892.1| 1512|Homo sapiens FLJ00137 protein protein.
Length = 1512
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 38 STITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTV 154
+T + DG +KIW ET + E+ H STL P V
Sbjct: 87 ATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPRV 125
>AK022748-1|BAB14222.1| 741|Homo sapiens protein ( Homo sapiens
cDNA FLJ12686 fis, clone NT2RM4002527, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 741
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 38 STITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTV 154
+T + DG +KIW ET + E+ H STL P V
Sbjct: 83 ATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPRV 121
>AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein.
Length = 166
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 310 WVPA---KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQT 441
WV A K + +T +DW+ K + +C D Y W+ +DG K T
Sbjct: 42 WVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPT 89
>AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 401
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 310 WVPA---KHFSAKVTALDWSRKYG-LYSCTKDSRVYEWNIEDGSVKQT 441
WV A K + +T +DW+ K + +C D Y W+ +DG K T
Sbjct: 73 WVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPT 120
>BC088354-1|AAH88354.1| 326|Homo sapiens G protein beta
subunit-like protein.
Length = 326
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEY 106
FS D +Y T + D ++W ET +K+EY
Sbjct: 278 FSGDSQYIVTASSDNLARLWCVETGEIKREY 308
>BC052292-1|AAH52292.1| 326|Homo sapiens GBL protein protein.
Length = 326
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEY 106
FS D +Y T + D ++W ET +K+EY
Sbjct: 278 FSGDSQYIVTASSDNLARLWCVETGEIKREY 308
>BC017119-1|AAH17119.1| 326|Homo sapiens G protein beta
subunit-like protein.
Length = 326
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEY 106
FS D +Y T + D ++W ET +K+EY
Sbjct: 278 FSGDSQYIVTASSDNLARLWCVETGEIKREY 308
>BC001313-1|AAH01313.1| 326|Homo sapiens G protein beta
subunit-like protein.
Length = 326
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEY 106
FS D +Y T + D ++W ET +K+EY
Sbjct: 278 FSGDSQYIVTASSDNLARLWCVETGEIKREY 308
>AY223837-1|AAO73410.1| 260|Homo sapiens LST8 protein.
Length = 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEY 106
FS D +Y T + D ++W ET +K+EY
Sbjct: 212 FSGDSQYIVTASSDNLARLWCVETGEIKREY 242
>AL121990-7|CAI22015.1| 589|Homo sapiens TAF5-like RNA polymerase
II, p300/CBP-associated factor (PCAF)-associated facto
protein.
Length = 589
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTVDKPVSQSVSN 184
FS +GKY ++ +D RLK+W + L +E ++L P S S+ N
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDN 532
>AJ009770-1|CAA08816.1| 260|Homo sapiens putative transcription
factor protein.
Length = 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTVDKPVSQSVSN 184
FS +GKY ++ +D RLK+W + L +E ++L P S S+ N
Sbjct: 147 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDN 203
>AF195883-1|AAF04308.1| 230|Homo sapiens G protein beta subunit
protein.
Length = 230
Score = 31.1 bits (67), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEY 106
FS D +Y T + D ++W ET +K+EY
Sbjct: 182 FSGDSQYIVTASSDNLARLWCVETGEIKREY 212
>AF069736-1|AAC39906.1| 589|Homo sapiens PCAF associated factor 65
beta protein.
Length = 589
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 14 FSEDGKYYSTITKDGRLKIWGTETNVLKQEYTPDLHLTSTLPTCPTVDKPVSQSVSN 184
FS +GKY ++ +D RLK+W + L +E ++L P S S+ N
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDN 532
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,144,571
Number of Sequences: 237096
Number of extensions: 2316528
Number of successful extensions: 12235
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 11707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12235
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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