Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30216.Seq
(367 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 62 3e-11
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 51 6e-08
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 49 3e-07
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 41 5e-05
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 40 2e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 36 0.001
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 28 0.39
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 28 0.52
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 0.69
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 25 2.8
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 25 3.7
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 24 6.4
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 24 6.4
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 8.5
SPAC4D7.11 |||conserved fungal protein|Schizosaccharomyces pombe... 24 8.5
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 24 8.5
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 24 8.5
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 62.1 bits (144), Expect = 3e-11
Identities = 25/53 (47%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 TEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 253
++E+++VL NF+ ++ T+ +LVEFYAPWCGHCK+LAP Y K A + +++
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDD 405
Score = 59.3 bits (137), Expect = 2e-10
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 119 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEDL 259
++K +IT + ++V+FYAPWCGHCK+LAPEY AA +L ++ +
Sbjct: 27 VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGI 73
Score = 46.4 bits (105), Expect = 1e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 366
I L +VD T+E DL Y +RGYPTL F+NG I
Sbjct: 73 ISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQI 107
Score = 28.7 bits (61), Expect = 0.30
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 256 SPIKLAKVDATQEQDLAESYGVRGYPTLKFFR 351
S + +AK+DAT E D++ S + G+PT+ FF+
Sbjct: 406 SNVVVAKIDAT-ENDISVS--ISGFPTIMFFK 434
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 50.8 bits (116), Expect = 6e-08
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +2
Query: 44 LIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 223
L +L+ G N + L+ NF + LV FYAPWCG+CK L P Y
Sbjct: 11 LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70
Query: 224 AKAATKL 244
K A+ L
Sbjct: 71 QKLASNL 77
Score = 27.5 bits (58), Expect = 0.69
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 259 PIKLAKVDATQEQDLAESYGVRGYPTLK 342
P+ DA Q + + Y V+G+PT+K
Sbjct: 82 PVTAVDCDADQNRAVCSQYQVQGFPTIK 109
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 48.8 bits (111), Expect = 3e-07
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 107 NVLVLSKANFETVITTTEY-ILVEFYAPWCGHCKSLAPEY 223
NV+ L NF+ V+ + +LVEFYA WCG+CK LAP Y
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY 180
Score = 46.4 bits (105), Expect = 1e-06
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +2
Query: 29 IEMRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKS 208
+ + +L F AL L V +++ L T+ + + L+EFYA WCGHCKS
Sbjct: 1 MRLPLLSFVIFALFALVFASGVVELQSLNELEN----TIRASKKGALIEFYATWCGHCKS 56
Query: 209 LAPEY 223
LAP Y
Sbjct: 57 LAPVY 61
Score = 31.5 bits (68), Expect = 0.042
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFF 348
+ + K+DA D+A+ Y + G+PTL +F
Sbjct: 74 VLIGKIDADTHSDVADKYHITGFPTLIWF 102
Score = 26.2 bits (55), Expect = 1.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 262 IKLAKVDATQEQDLAESYGVRGYPTLKFF 348
+++ K++A D+ + V +PT+KFF
Sbjct: 193 VEIVKINADVFADIGRLHEVASFPTIKFF 221
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 41.1 bits (92), Expect = 5e-05
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = +2
Query: 116 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 223
V + F++++ + ++V+F+A WCG CK++AP++
Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF 40
Score = 26.2 bits (55), Expect = 1.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 274 KVDATQEQDLAESYGVRGYPTLKFFRNGSPI 366
KVD Q ++A GV P+ ++NG I
Sbjct: 54 KVDVDQLSEIAAEAGVHAMPSFFLYKNGEKI 84
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 39.5 bits (88), Expect = 2e-04
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 116 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLA 247
+ S ++ + I + Y+ V+ YA WCG CK+++P +++ A+K A
Sbjct: 6 IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYA 49
Score = 32.7 bits (71), Expect = 0.018
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 271 AKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 366
AKV+ +++ +A GV+ PT FF NG I
Sbjct: 56 AKVNVDEQRQIASGLGVKAMPTFVFFENGKQI 87
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 36.3 bits (80), Expect = 0.001
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 116 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAP 217
V S ++ T I+ + +V+FYA WCG CK L P
Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP 55
Score = 26.2 bits (55), Expect = 1.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 277 VDATQEQDLAESYGVRGYPTLKFFRNGSPI 366
V+A + D+A+ GV PT+ FR G +
Sbjct: 72 VNADKFSDIAQKNGVYALPTMVLFRKGQEL 101
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 28.3 bits (60), Expect = 0.39
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 170 VEFYAPWCGHCKSLAPEYAKAATKLAEE 253
+++Y P CG CK L P + K E+
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVEKAKEQ 74
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 0.52
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 158 EYILVEFYAPWCGHCKSL 211
+ IL+ FYAPW CK +
Sbjct: 21 QIILLNFYAPWAAPCKQM 38
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 27.5 bits (58), Expect = 0.69
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 105 KMCSF*VKLTLKL*LQPRSTF*LNSMLHGAATANLWHRNTP 227
K +F L LQP T N +L+ + NLW R+ P
Sbjct: 620 KSANFDFSFLKSLDLQPTITLGKNDLLNAILSQNLWFRSLP 660
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 25.4 bits (53), Expect = 2.8
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 201 ANLWHRNTPRQQQSWLKKISYQTSES*RNSRTGSRRELRCTRIPD 335
AN + + QSW +++ + +E+ S S R + T IP+
Sbjct: 74 ANSFEGSCNNSDQSWTSRVTSKKNEAGTESGDASVRRIYVTSIPE 118
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 25.0 bits (52), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 301 LAESYGVRGYPTLKFFRNGSPI 366
LA YG + P++ RNG PI
Sbjct: 343 LANKYGAQSQPSIIAVRNGMPI 364
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 24.2 bits (50), Expect = 6.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 182 APWCGHCKSLAPEYAKAATKLAE 250
A WC HC + P K A K E
Sbjct: 484 ANWCCHCGYILPLGRKTARKCTE 506
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 24.2 bits (50), Expect = 6.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 159 STF*LNSMLHGAATANLWHRNTPRQQQSW 245
+++ +N+ML G A NLW+ N W
Sbjct: 301 NSYAMNNMLPGTAFKNLWNFNLLDASFGW 329
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 23.8 bits (49), Expect = 8.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 280 DATQEQDLAESYGVRGYPTLKFFRNGSP 363
D + Q+L ES G YP++ FF P
Sbjct: 665 DDSTTQNLTESLGSVCYPSMPFFNQYVP 692
>SPAC4D7.11 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 281
Score = 23.8 bits (49), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 171 LNSMLHGAATANLWHRNTPRQQQS 242
L S HG + + +RNTP Q+QS
Sbjct: 201 LYSFQHGLSFGSPQNRNTPLQRQS 224
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 23.8 bits (49), Expect = 8.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 281 STFASLIGDLLQPALLLPWRIPVPEICSGRTMEHRIQL 168
S F L D +PA P IP+ + S + M I+L
Sbjct: 434 SEFGELFVDFRRPARSYPAHIPLMSLSSTKRMASYIKL 471
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 23.8 bits (49), Expect = 8.5
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +2
Query: 101 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 235
+ENV ++ K+N+ + T E + + + G+ ++ P YA ++
Sbjct: 4 KENVNLVEKSNYVALENTREIDVFDEFLNAIGNENTITPVYADSS 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,415,642
Number of Sequences: 5004
Number of extensions: 25052
Number of successful extensions: 94
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 114084208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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