Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30215.Seq
(344 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181; Eukary... 149 9e-36
UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeb... 89 2e-17
UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5... 83 9e-16
UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus M... 76 2e-13
UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2; Methano... 72 3e-12
UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 66 2e-10
UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1; Encephal... 64 5e-10
UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella... 60 8e-09
UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3; Euth... 60 1e-08
UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8; Euryarc... 60 1e-08
UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n... 58 3e-08
UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3; Thermop... 58 3e-08
UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12; Archae... 58 4e-08
UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultu... 58 5e-08
UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcu... 54 5e-07
UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3; Methano... 54 7e-07
UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3; Halobac... 52 2e-06
UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2; Sulfolo... 52 3e-06
UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5; Thermop... 50 8e-06
UniRef50_A5BYX8 Cluster: Putative uncharacterized protein; n=1; ... 47 7e-05
UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 44 0.001
UniRef50_Q8SRU8 Cluster: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN; n... 41 0.006
UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1... 40 0.009
UniRef50_Q9SZ81 Cluster: Putative ribosomal protein; n=1; Arabid... 40 0.015
UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n... 35 0.43
UniRef50_Q4P328 Cluster: Helicase SWR1; n=1; Ustilago maydis|Rep... 34 0.56
UniRef50_Q9NV31 Cluster: U3 small nucleolar ribonucleoprotein pr... 34 0.56
UniRef50_A1VAB9 Cluster: DegT/DnrJ/EryC1/StrS aminotransferase; ... 32 3.0
UniRef50_Q86UK0 Cluster: ATP-binding cassette sub-family A membe... 32 3.0
UniRef50_UPI0000DBF3A8 Cluster: UPI0000DBF3A8 related cluster; n... 31 4.0
UniRef50_A7M543 Cluster: Putative uncharacterized protein; n=1; ... 31 4.0
UniRef50_A4C1Y1 Cluster: Putative outer membrane protein; n=1; P... 31 5.3
UniRef50_Q96XL2 Cluster: Putative uncharacterized protein ST2504... 31 5.3
UniRef50_Q6A6D4 Cluster: Putative cell wall-associated hydrolase... 31 6.9
UniRef50_A6TUV4 Cluster: Fumarate reductase/succinate dehydrogen... 31 6.9
UniRef50_A0B7K6 Cluster: Thiamine biosynthesis protein; n=1; Met... 31 6.9
UniRef50_Q2IEA1 Cluster: Mammalian cell entry related protein pr... 30 9.2
UniRef50_Q7SBP0 Cluster: Predicted protein; n=1; Neurospora cras... 30 9.2
UniRef50_Q0UYK5 Cluster: Predicted protein; n=1; Phaeosphaeria n... 30 9.2
UniRef50_Q72JR6 Cluster: Isoleucyl-tRNA synthetase; n=3; Thermus... 30 9.2
>UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181;
Eukaryota|Rep: 40S ribosomal protein S9 - Homo sapiens
(Human)
Length = 194
Score = 149 bits (362), Expect = 9e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 202 PKRLFEGNALLRRLVRIG 255
P+RLFEGNALLRRLVRIG
Sbjct: 68 PRRLFEGNALLRRLVRIG 85
Score = 56.4 bits (130), Expect = 1e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +3
Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
VLDE +MKLDY+LGLKI DFLERRLQTQVF
Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115
>UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeba
histolytica|Rep: 40S ribosomal protein S9 - Entamoeba
histolytica
Length = 185
Score = 89.0 bits (211), Expect = 2e-17
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = +1
Query: 28 SKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPK 207
S TY TP+ P+E+ R D ELK++G++GL+NK+E+ RV Y L +R A+ +L + KDPK
Sbjct: 9 SITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPK 68
Query: 208 RLFEGNALLRRLVRIG 255
RL EG ALLRRL +G
Sbjct: 69 RLLEGAALLRRLHNLG 84
Score = 33.9 bits (74), Expect = 0.75
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
+L Q KL++VL LK + LERRLQT V+
Sbjct: 85 ILPRDQNKLEFVLALKEENLLERRLQTLVY 114
>UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5;
Oryza sativa|Rep: 40S ribosomal protein S9, putative -
Oryza sativa subsp. japonica (Rice)
Length = 157
Score = 83.4 bits (197), Expect = 9e-16
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +1
Query: 25 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 204
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV +ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRV-----------QELLTLDEKNP 58
Query: 205 KRLFEGNALLRRLVRIG 255
+R+FEG ALLR + R G
Sbjct: 59 RRIFEGEALLRHMNRYG 75
Score = 38.7 bits (86), Expect = 0.026
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 249 YWVLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
Y +L E Q KLDYVL L + +FL+ RLQT VF
Sbjct: 74 YGLLGEGQNKLDYVLALTVENFLQCRLQTIVF 105
>UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S4 -
Methanoregula boonei (strain 6A8)
Length = 185
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +1
Query: 16 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 189
P K+Y TP+RPFEK R+++E +++ EYGLRNKREVW+ + L + RKAARELL L
Sbjct: 4 PGKNHKSYQTPKRPFEKTRIEEETRLVIEYGLRNKREVWKAQSHLRKYRKAARELLAL 61
>UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2;
Methanomicrobiales|Rep: 30S ribosomal protein S4P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 181
Score = 71.7 bits (168), Expect = 3e-12
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = +1
Query: 16 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 192
P K Y TP+RPFE +R+++E +++ EYGLRNKREVW K L + RKAARE++ L+
Sbjct: 4 PGKNHKQYQTPKRPFELSRIEEETRLVIEYGLRNKREVWIAKGALRKYRKAAREIIALQ 62
>UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Thermoplasma
volcanium
Length = 200
Score = 66.1 bits (154), Expect = 2e-10
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 16 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL-LTLE 192
P K Y TPR P+EK R+D+E KI+ +YGL+NKRE+WR + L+ IR AR L L
Sbjct: 4 PKFHHKKYSTPRHPWEKDRIDEENKILVKYGLKNKREIWRSEAMLSSIRSQARYLRARLR 63
Query: 193 EKDPKRLFEGNALLRRLVR 249
D + +++RL R
Sbjct: 64 ASDANAQKQLERMIKRLSR 82
>UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S9 -
Encephalitozoon cuniculi
Length = 184
Score = 64.5 bits (150), Expect = 5e-10
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 28 SKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPK 207
SK TPR PFEK RL +E +++G YGL+NK E+W ++ A+ ++ AR LLT +P+
Sbjct: 7 SKRASTPRDPFEKERLIREAQLVGVYGLKNKHELWVMEKIFAKDKERARILLT--STNPE 64
Query: 208 RL-FEGNALLRRLVRIG 255
+ G +LLRRL++ G
Sbjct: 65 DIPINGRSLLRRLMKYG 81
>UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella
natans|Rep: Ribosomal protein S9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 180
Score = 60.5 bits (140), Expect = 8e-09
Identities = 24/58 (41%), Positives = 42/58 (72%)
Frame = +1
Query: 25 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEK 198
+SK + P+ P+EK RL E+++I +GL+NKRE+WR ++ L+++RK A +L+ + K
Sbjct: 10 YSKIWNRPKNPYEKLRLCNEIRMINLFGLKNKRELWRTQFFLSKLRKVAEKLIYKKAK 67
>UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3;
Eutheria|Rep: Ribosomal subunit protein S9 - Trichechus
manatus latirostris
Length = 30
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = +1
Query: 127 VWRVKYTLARIRKAARELLTLEEKDPKRLF 216
VWRVK+TLA+IRKAARELLTL+EKDP+RLF
Sbjct: 1 VWRVKFTLAKIRKAARELLTLDEKDPRRLF 30
>UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S4P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 219
Score = 59.7 bits (138), Expect = 1e-08
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +1
Query: 16 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 183
P SK+Y TPR P+++AR+ E++++ YGLRNK+EVW+ L R AR+LL
Sbjct: 4 PGKKSKSYETPRHPWQEARMAAEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLL 59
>UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000501C59 UniRef100 entry -
Rattus norvegicus
Length = 199
Score = 58.4 bits (135), Expect = 3e-08
Identities = 30/45 (66%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 124 EVWRVKYTLARIRKAARE-LLTLEEKDPKRLFEGNALLRRLVRIG 255
EVWRVK+TL +IRKA E LL L EKDP+ LFE N LLR+LV G
Sbjct: 41 EVWRVKFTLTKIRKAFWELLLLLNEKDPRYLFEDNLLLRQLVHTG 85
>UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S4P -
Cenarchaeum symbiosum
Length = 205
Score = 58.4 bits (135), Expect = 3e-08
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +1
Query: 16 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 195
P + + + P+RPF +EL+ +G +GLR KRE+W+ L+R+R AR LL L +
Sbjct: 4 PKLPRRMWRKPKRPFNYDLKMEELRTLGTFGLRTKRELWKAHTELSRVRNQARSLLALGQ 63
Query: 196 KDPKRLFEGNALLRRLVRIG 255
+ +R + LLR L RIG
Sbjct: 64 EVRER--KEPVLLRSLARIG 81
>UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12;
Archaea|Rep: 30S ribosomal protein S4P - Methanococcus
jannaschii
Length = 187
Score = 58.0 bits (134), Expect = 4e-08
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +1
Query: 25 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLT 186
F KTY TP P+ K R+++E ++ +YGLR KREVW+ + L + R+ AR L++
Sbjct: 8 FKKTYETPNHPWIKERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLIS 61
Score = 33.5 bits (73), Expect = 0.98
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 249 YWVLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
Y +L + LD VL L + D LERRLQT VF
Sbjct: 81 YGILKIENPTLDDVLSLTVEDILERRLQTLVF 112
>UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultured
methanogenic archaeon RC-I|Rep: 30S ribosomal protein
S4P - Uncultured methanogenic archaeon RC-I
Length = 205
Score = 57.6 bits (133), Expect = 5e-08
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +1
Query: 16 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 183
P K Y TP P++KAR+D+E ++ +YGLRNK+ VW+ L + R AR LL
Sbjct: 4 PGQAKKLYDTPNHPWQKARIDEETSLVKKYGLRNKKSVWKHASDLRKYRSNARALL 59
Score = 31.5 bits (68), Expect = 4.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 264 EKQMKLDYVLGLKIXDFLERRLQTQVF 344
++ KL+ VL LK+ D +ERRLQT ++
Sbjct: 91 KEDAKLEDVLALKVDDIMERRLQTIIY 117
>UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcus
aeolicus Nankai-3|Rep: Ribosomal protein S4 -
Methanococcus aeolicus Nankai-3
Length = 177
Score = 54.4 bits (125), Expect = 5e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1
Query: 16 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLT 186
P SKTY TP P+ R+ QE ++ +YGL NK+E+W+++ L R+ AR+L++
Sbjct: 4 PRRLSKTYDTPNHPWIGERIKQERELSNKYGLSNKKEIWKMETRLRTFRRQARKLIS 60
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 249 YWVLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
Y +L ++ LD VL L + LERRLQT VF
Sbjct: 80 YGILLKEDATLDDVLSLNLESILERRLQTLVF 111
>UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 182
Score = 54.0 bits (124), Expect = 7e-07
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +1
Query: 31 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 210
K Y TP P+ R+ +E ++ +YGL+NK+E+W+ + + R R+ AR +L ++ + R
Sbjct: 9 KQYDTPSHPWNADRIKEENRLANKYGLKNKKEIWKAESRVKRYRRDARIILGMDIDE--R 66
Query: 211 LFEGNALLRRLVRIGYWMKN 270
+ LL LVR G+ N
Sbjct: 67 ADKEKELLDHLVRAGFISPN 86
>UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S4P -
Halobacterium salinarium (Halobacterium halobium)
Length = 170
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +1
Query: 13 VPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 192
+P +K Y TP P++ R+ +E ++ YGL+NK E+WR + L R+ AR LL
Sbjct: 3 LPGENTKFYETPNHPYQGERIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLL--- 59
Query: 193 EKDPKRLFEGNALLRRLVRIG 255
G + RL RIG
Sbjct: 60 --GQTGTVSGEEFVARLQRIG 78
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
+L E++ +LD VL L++ D LERRLQT V+
Sbjct: 79 ILSEEE-RLDDVLSLEVTDVLERRLQTVVY 107
>UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2;
Sulfolobaceae|Rep: 30S ribosomal protein S4P -
Sulfolobus tokodaii
Length = 177
Score = 52.0 bits (119), Expect = 3e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +1
Query: 16 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 195
P + + P P+ + L++E +IG+YGLRNKRE+W + + + R AR LL L
Sbjct: 4 PKKSRRKWEGPGHPWIRINLEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLALPP 63
Query: 196 KDPKRLFEGNALLRRLVRIG 255
+ R L+++L R+G
Sbjct: 64 AE--RSTREKQLIQKLYRMG 81
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
++++ LD +LGL ++LERRLQT V+
Sbjct: 82 IIEKDNATLDDILGLNEENYLERRLQTIVY 111
>UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S4P -
Pyrobaculum aerophilum
Length = 159
Score = 50.4 bits (115), Expect = 8e-06
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +1
Query: 46 PRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL--TLEEKDP 204
P++ + K L +EL+++GEYGLRNK+E+W + L I + AR LL T EE+ P
Sbjct: 16 PKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAP 70
>UniRef50_A5BYX8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 187
Score = 47.2 bits (107), Expect = 7e-05
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 25 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 183
+ KT+ R + K LD ELK IG Y LR KRE+W V+ +LA ++K L+
Sbjct: 119 YGKTFKESRSSYGKGFLDAELKFIGGYELRCKRELWSVQMSLAALQKYFSSLM 171
>UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Nanoarchaeum
equitans
Length = 180
Score = 43.6 bits (98), Expect = 0.001
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 46 PRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLF-EG 222
P P++K RL E +++ EYGL+NKRE+W + T+AR +A L ++ + + E
Sbjct: 11 PSHPWQKQRLIIEKRLMKEYGLKNKRELW-IAETIARKWRAYARYLNAKQAAGQDISEEK 69
Query: 223 NALLRRLVRIGYWMKN 270
L +L ++G +N
Sbjct: 70 ERFLTKLKKLGVLSEN 85
>UniRef50_Q8SRU8 Cluster: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN; n=1;
Encephalitozoon cuniculi|Rep: U3 SMALL NUCLEOLAR
RIBONUCLEOPROTEIN - Encephalitozoon cuniculi
Length = 180
Score = 40.7 bits (91), Expect = 0.006
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 94 IGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGYWMKNR 273
I +YGLR++ E + + ++RK A L L+E DP R L+ RL +G +KNR
Sbjct: 32 IAKYGLRDREEYTKYSRIVGKVRKLAEALARLKESDPVRTTITKKLVGRLYSVGV-IKNR 90
>UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1;
uncultured euryarchaeote ARMAN-2|Rep: Ribosomal protein
small subunit S9 - uncultured euryarchaeote ARMAN-2
Length = 187
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 31 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLT 186
+ Y P+ + AR+ + +I EYGL N E+W+V+ ++R+R R LL+
Sbjct: 9 RKYDKPKDIWNLARIKADNALIAEYGLANMHELWKVQSEISRLRGNVRVLLS 60
>UniRef50_Q9SZ81 Cluster: Putative ribosomal protein; n=1;
Arabidopsis thaliana|Rep: Putative ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 106
Score = 39.5 bits (88), Expect = 0.015
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 261 DEKQMKLDYVLGLKIXDFLERRLQTQVF 344
D ++ KLDYVL L + +FLERRLQT VF
Sbjct: 17 DSEKNKLDYVLALTVENFLERRLQTIVF 44
>UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 09 contig 1, DNA
sequence - Ostreococcus tauri
Length = 293
Score = 34.7 bits (76), Expect = 0.43
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -3
Query: 135 APYFTLVAETVLSDDLQLLVKTCLFKRTTRCHVRL 31
AP +LVA+ L+DDLQL V+ L +RT+R RL
Sbjct: 167 APQLSLVAKAELTDDLQLGVEAILLERTSRLLERL 201
>UniRef50_Q4P328 Cluster: Helicase SWR1; n=1; Ustilago maydis|Rep:
Helicase SWR1 - Ustilago maydis (Smut fungus)
Length = 1830
Score = 34.3 bits (75), Expect = 0.56
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 61 EKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRR 240
EK ++ L+ + ++ LR + WR+ + R RKAA E E+ D ++L NA+L +
Sbjct: 615 EKKAEERRLRALAKWTLREVLKQWRLAVNVVRARKAAAEKAEKEKSDKEQL---NAILEQ 671
>UniRef50_Q9NV31 Cluster: U3 small nucleolar ribonucleoprotein
protein IMP3; n=13; Euteleostomi|Rep: U3 small nucleolar
ribonucleoprotein protein IMP3 - Homo sapiens (Human)
Length = 184
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 82 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIG 255
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALG 87
>UniRef50_A1VAB9 Cluster: DegT/DnrJ/EryC1/StrS aminotransferase;
n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
DegT/DnrJ/EryC1/StrS aminotransferase - Desulfovibrio
vulgaris subsp. vulgaris (strain DP4)
Length = 392
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 67 ARLDQELKIIGEYGLRNKREVWRVKYTLA 153
A L Q ++++ YG+ + RE+W+ +YT A
Sbjct: 203 ADLAQRMRVLSMYGISDAREIWQKRYTRA 231
>UniRef50_Q86UK0 Cluster: ATP-binding cassette sub-family A member 12;
n=29; Fungi/Metazoa group|Rep: ATP-binding cassette
sub-family A member 12 - Homo sapiens (Human)
Length = 2595
Score = 31.9 bits (69), Expect = 3.0
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 220 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 62
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 61 QKDDEVSRTSLKIPTVL 11
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>UniRef50_UPI0000DBF3A8 Cluster: UPI0000DBF3A8 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DBF3A8 UniRef100 entry -
Rattus norvegicus
Length = 1725
Score = 31.5 bits (68), Expect = 4.0
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 220 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 62
+RT W P P +H Q YG Y + I RAI+ G R + + Q VP F
Sbjct: 23 IRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEVAVQVQAVPYPCF 81
Query: 61 QKDDEVSRTSLKIPTVL 11
KD+ ++ S +P VL
Sbjct: 82 MKDNFLTSVSYSLPIVL 98
>UniRef50_A7M543 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 918
Score = 31.5 bits (68), Expect = 4.0
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 115 NKREVWRVKYTLARIRKAARELLTLEEKDPK 207
+KR + K+T++R+R+ EL++ EE+DP+
Sbjct: 673 DKRVKYYSKFTISRLREGRPELISYEEQDPR 703
>UniRef50_A4C1Y1 Cluster: Putative outer membrane protein; n=1;
Polaribacter irgensii 23-P|Rep: Putative outer membrane
protein - Polaribacter irgensii 23-P
Length = 591
Score = 31.1 bits (67), Expect = 5.3
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 127 VWRVKYTLARIRKAARELLTLEEKDPK 207
+W++ Y++ +I A +LT+EE+D +
Sbjct: 115 IWKINYSIEKIASAPENILTVEERDER 141
>UniRef50_Q96XL2 Cluster: Putative uncharacterized protein ST2504;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST2504 - Sulfolobus tokodaii
Length = 509
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +1
Query: 7 NRVP-SVFSKTYVTPRR-PFEKAR--LDQELKIIGEYGLRNKREVWRVKYTLARIRK 165
N VP ++ ++ Y + P + AR L++ LK++ E G+ K + + + YTL R+ K
Sbjct: 22 NAVPLTIMAEEYAKEKNIPKQSARKVLEKRLKVLVEQGIVEKLKTYPISYTLKRLPK 78
>UniRef50_Q6A6D4 Cluster: Putative cell wall-associated hydrolase;
n=1; Propionibacterium acnes|Rep: Putative cell
wall-associated hydrolase - Propionibacterium acnes
Length = 415
Score = 30.7 bits (66), Expect = 6.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 235 VEGHYLRTISWGPSPRG*GAHEQPYGYERA 146
++ HYL +++W PSP A P G +A
Sbjct: 119 IDHHYLSSVAWRPSPSSPSASSSPVGIAQA 148
>UniRef50_A6TUV4 Cluster: Fumarate reductase/succinate dehydrogenase
flavoprotein domain protein precursor; n=1; Alkaliphilus
metalliredigens QYMF|Rep: Fumarate reductase/succinate
dehydrogenase flavoprotein domain protein precursor -
Alkaliphilus metalliredigens QYMF
Length = 754
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 121 REVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 231
RE W KY +A +R + L T+ ++ P R+ E +L
Sbjct: 180 REFWAAKYPVAMLRDTPQILKTVTDRLPDRIVESQSL 216
>UniRef50_A0B7K6 Cluster: Thiamine biosynthesis protein; n=1;
Methanosaeta thermophila PT|Rep: Thiamine biosynthesis
protein - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 335
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 46 PRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRK 165
P++P +ARL++ L+I GE GLR+ + RIR+
Sbjct: 296 PKKPVTRARLEEILRIEGELGLRDLAMELADGVEIVRIRR 335
>UniRef50_Q2IEA1 Cluster: Mammalian cell entry related protein
precursor; n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
Mammalian cell entry related protein precursor -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 322
Score = 30.3 bits (65), Expect = 9.2
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 70 RLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE---KDPKRLFEGNALLRR 240
R D L+ +G W++ TLA ++ AAR L L E +DP L G A +RR
Sbjct: 263 RADGALRDVGALVDPASPVAWQLGATLAELQGAARALRHLAEDLDRDPSALVRGRAEVRR 322
>UniRef50_Q7SBP0 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 304
Score = 30.3 bits (65), Expect = 9.2
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Frame = +1
Query: 58 FEKARLDQELKIIGEYG----------LRNKREVWRVKYTLARIRKAARELLTL--EEKD 201
FE +RLD L +G +G RN +W VK TLA + + L T+ E
Sbjct: 75 FELSRLDAALHALGYFGDQEPSTEDKKERNMNVLWDVKMTLAEFWEYVKNLRTILVSESQ 134
Query: 202 PKRLFEGNALLRRL 243
+R++ N L R L
Sbjct: 135 SERVWSKNKLDREL 148
>UniRef50_Q0UYK5 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 222
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 76 DQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFE 219
D+ELK + G + E WRV+ + + + RE+L + + + FE
Sbjct: 111 DEELKTVRLEGEMDATEFWRVQAVVEELERVLREMLNRDVRAGRSEFE 158
>UniRef50_Q72JR6 Cluster: Isoleucyl-tRNA synthetase; n=3; Thermus
thermophilus|Rep: Isoleucyl-tRNA synthetase - Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Length = 1043
Score = 30.3 bits (65), Expect = 9.2
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 37 YVTPRRP-FEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201
Y PRR ++ L EL++ + GL++KRE+ Y + R +A RE + EK+
Sbjct: 76 YYAPRRAGWDTHGLPVELEVEKKLGLKSKREI--EAYGIERFNQACRESVFTYEKE 129
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,720,067
Number of Sequences: 1657284
Number of extensions: 5254346
Number of successful extensions: 12500
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 12320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12498
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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