BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= psV30215.Seq (344 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 149 2e-36 BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 149 2e-36 BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 149 2e-36 BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 149 2e-36 BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 149 2e-36 BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 149 2e-36 BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 149 2e-36 AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 149 2e-36 U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 149 3e-36 AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 135 3e-32 AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 2e-29 BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 56 2e-08 BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 34 0.10 BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 34 0.10 AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 34 0.10 AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 34 0.10 AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 34 0.10 AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 32 0.55 AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 32 0.55 AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 32 0.55 AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 32 0.55 >BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (362), Expect = 2e-36 Identities = 70/78 (89%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVRIG Sbjct: 68 PRRLFEGNALLRRLVRIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (362), Expect = 2e-36 Identities = 70/78 (89%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVRIG Sbjct: 68 PRRLFEGNALLRRLVRIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (362), Expect = 2e-36 Identities = 70/78 (89%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVRIG Sbjct: 68 PRRLFEGNALLRRLVRIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (362), Expect = 2e-36 Identities = 70/78 (89%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVRIG Sbjct: 68 PRRLFEGNALLRRLVRIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (362), Expect = 2e-36 Identities = 70/78 (89%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVRIG Sbjct: 68 PRRLFEGNALLRRLVRIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (362), Expect = 2e-36 Identities = 70/78 (89%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVRIG Sbjct: 68 PRRLFEGNALLRRLVRIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (362), Expect = 2e-36 Identities = 70/78 (89%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVRIG Sbjct: 68 PRRLFEGNALLRRLVRIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (362), Expect = 2e-36 Identities = 70/78 (89%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVRIG Sbjct: 68 PRRLFEGNALLRRLVRIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 protein. Length = 194 Score = 149 bits (360), Expect = 3e-36 Identities = 69/78 (88%), Positives = 76/78 (97%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALLRRLVR+G Sbjct: 68 PRRLFEGNALLRRLVRLG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA sequence from clone RP11-12M9 on chromosome 22. ). Length = 194 Score = 135 bits (327), Expect = 3e-32 Identities = 65/78 (83%), Positives = 72/78 (92%) Frame = +1 Query: 22 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 201 V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67 Query: 202 PKRLFEGNALLRRLVRIG 255 P+RLFEGNALL RLV IG Sbjct: 68 PRRLFEGNALLWRLVCIG 85 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 86 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 115 >AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 protein. Length = 64 Score = 126 bits (304), Expect = 2e-29 Identities = 57/63 (90%), Positives = 63/63 (100%) Frame = +1 Query: 31 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 210 KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61 Query: 211 LFE 219 LFE Sbjct: 62 LFE 64 >BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. Length = 113 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344 VLDE +MKLDY+LGLKI DFLERRLQTQVF Sbjct: 25 VLDEGKMKLDYILGLKIEDFLERRLQTQVF 54 Score = 41.5 bits (93), Expect = 7e-04 Identities = 18/20 (90%), Positives = 20/20 (100%) Frame = +1 Query: 196 KDPKRLFEGNALLRRLVRIG 255 +DP+RLFEGNALLRRLVRIG Sbjct: 5 EDPRRLFEGNALLRRLVRIG 24 >BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) protein. Length = 184 Score = 34.3 bits (75), Expect = 0.10 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 82 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIG 255 EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALG 87 >BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) protein. Length = 184 Score = 34.3 bits (75), Expect = 0.10 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 82 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIG 255 EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALG 87 >AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. Length = 184 Score = 34.3 bits (75), Expect = 0.10 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 82 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIG 255 EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALG 87 >AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 homolog protein. Length = 184 Score = 34.3 bits (75), Expect = 0.10 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 82 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIG 255 EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALG 87 >AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens cDNA FLJ10968 fis, clone PLACE1000863, moderately similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN YHR148W. ). Length = 184 Score = 34.3 bits (75), Expect = 0.10 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 82 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIG 255 EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALG 87 >AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily A protein. Length = 2595 Score = 31.9 bits (69), Expect = 0.55 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%) Frame = -2 Query: 220 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 62 LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056 Query: 61 QKDDEVSRTSLKIPTVL 11 KD+ ++ S +P VL Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073 >AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette transporter family A member 12 protein. Length = 2277 Score = 31.9 bits (69), Expect = 0.55 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%) Frame = -2 Query: 220 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 62 LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738 Query: 61 QKDDEVSRTSLKIPTVL 11 KD+ ++ S +P VL Sbjct: 739 MKDNFLTSVSYSLPIVL 755 >AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette transporter family A member 12 protein. Length = 2347 Score = 31.9 bits (69), Expect = 0.55 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%) Frame = -2 Query: 220 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 62 LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808 Query: 61 QKDDEVSRTSLKIPTVL 11 KD+ ++ S +P VL Sbjct: 809 MKDNFLTSVSYSLPIVL 825 >AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. Length = 2413 Score = 31.9 bits (69), Expect = 0.55 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%) Frame = -2 Query: 220 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 62 LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056 Query: 61 QKDDEVSRTSLKIPTVL 11 KD+ ++ S +P VL Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 44,604,572 Number of Sequences: 237096 Number of extensions: 819106 Number of successful extensions: 1647 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1647 length of database: 76,859,062 effective HSP length: 80 effective length of database: 57,891,382 effective search space used: 1968306988 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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