Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30215.Seq
(344 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 164 3e-41
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 164 3e-41
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 164 3e-41
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 164 3e-41
X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal prot... 137 3e-33
BT029269-1|ABK30906.1| 1256|Drosophila melanogaster IP08282p pro... 27 5.0
AE014297-1548|AAF54832.1| 624|Drosophila melanogaster CG18554-P... 27 5.0
BT010081-1|AAQ22550.1| 524|Drosophila melanogaster LD07278p pro... 27 6.5
AE014298-689|AAF45992.1| 524|Drosophila melanogaster CG6927-PA ... 27 6.5
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 164 bits (398), Expect = 3e-41
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = +1
Query: 1 VNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL 180
VN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAAREL
Sbjct: 2 VNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAAREL 61
Query: 181 LTLEEKDPKRLFEGNALLRRLVRIGYWMKNR 273
LTL+EKD KRLF+GNALLRRLVRIG ++R
Sbjct: 62 LTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +3
Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
VLDE +MKLDYVLGLKI DFLERRLQTQVF
Sbjct: 87 VLDESRMKLDYVLGLKIEDFLERRLQTQVF 116
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 164 bits (398), Expect = 3e-41
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = +1
Query: 1 VNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL 180
VN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAAREL
Sbjct: 2 VNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAAREL 61
Query: 181 LTLEEKDPKRLFEGNALLRRLVRIGYWMKNR 273
LTL+EKD KRLF+GNALLRRLVRIG ++R
Sbjct: 62 LTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +3
Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
VLDE +MKLDYVLGLKI DFLERRLQTQVF
Sbjct: 87 VLDESRMKLDYVLGLKIEDFLERRLQTQVF 116
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 164 bits (398), Expect = 3e-41
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = +1
Query: 1 VNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL 180
VN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAAREL
Sbjct: 2 VNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAAREL 61
Query: 181 LTLEEKDPKRLFEGNALLRRLVRIGYWMKNR 273
LTL+EKD KRLF+GNALLRRLVRIG ++R
Sbjct: 62 LTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +3
Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
VLDE +MKLDYVLGLKI DFLERRLQTQVF
Sbjct: 87 VLDESRMKLDYVLGLKIEDFLERRLQTQVF 116
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 164 bits (398), Expect = 3e-41
Identities = 78/91 (85%), Positives = 85/91 (93%)
Frame = +1
Query: 1 VNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL 180
VN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAAREL
Sbjct: 2 VNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAAREL 61
Query: 181 LTLEEKDPKRLFEGNALLRRLVRIGYWMKNR 273
LTL+EKD KRLF+GNALLRRLVRIG ++R
Sbjct: 62 LTLDEKDEKRLFQGNALLRRLVRIGVLDESR 92
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +3
Query: 255 VLDEKQMKLDYVLGLKIXDFLERRLQTQVF 344
VLDE +MKLDYVLGLKI DFLERRLQTQVF
Sbjct: 87 VLDESRMKLDYVLGLKIEDFLERRLQTQVF 116
>X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal protein
protein.
Length = 197
Score = 137 bits (332), Expect = 3e-33
Identities = 67/85 (78%), Positives = 75/85 (88%)
Frame = +1
Query: 1 VNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL 180
VN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+ R V VKY LA+IRK AREL
Sbjct: 2 VNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVAREL 60
Query: 181 LTLEEKDPKRLFEGNALLRRLVRIG 255
LTL+EKD KRLF+G +L+RRLVRIG
Sbjct: 61 LTLDEKDAKRLFQGKSLVRRLVRIG 85
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2
Query: 275 ETRLCAWSEDXGLLGASSADAGV 343
E RL A SED GLLGASSADAGV
Sbjct: 92 EARLRAGSEDSGLLGASSADAGV 114
>BT029269-1|ABK30906.1| 1256|Drosophila melanogaster IP08282p
protein.
Length = 1256
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +1
Query: 61 EKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRR 240
E R E + + E + K + + + L++ ++++ E TLE+K + EG++ RR
Sbjct: 600 EFLRTISESRALPEQPVPGKEKGFNILSLLSKTKRSSTECFTLEKKRHQANSEGSSFFRR 659
>AE014297-1548|AAF54832.1| 624|Drosophila melanogaster CG18554-PA
protein.
Length = 624
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +1
Query: 61 EKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRR 240
E R E + + E + K + + + L++ ++++ E TLE+K + EG++ RR
Sbjct: 210 EFLRTISESRALPEQPVPGKEKGFNILSLLSKTKRSSTECFTLEKKRHQANSEGSSFFRR 269
>BT010081-1|AAQ22550.1| 524|Drosophila melanogaster LD07278p
protein.
Length = 524
Score = 27.1 bits (57), Expect = 6.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 10 RVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 189
++ ++ Y+ PR F + I+GE LRN +W LA R ++ +L L
Sbjct: 89 KIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRN--SLWMPHIFLANERDSS--ILGL 144
Query: 190 EEKD 201
EKD
Sbjct: 145 TEKD 148
>AE014298-689|AAF45992.1| 524|Drosophila melanogaster CG6927-PA
protein.
Length = 524
Score = 27.1 bits (57), Expect = 6.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 10 RVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL 189
++ ++ Y+ PR F + I+GE LRN +W LA R ++ +L L
Sbjct: 89 KIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRN--SLWMPHIFLANERDSS--ILGL 144
Query: 190 EEKD 201
EKD
Sbjct: 145 TEKD 148
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,895,526
Number of Sequences: 53049
Number of extensions: 244596
Number of successful extensions: 535
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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