Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30215.Seq
(344 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 1.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 1.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 1.0
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 4.1
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 21 5.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 7.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 7.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 7.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 7.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 7.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 7.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 7.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 7.2
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 20 9.5
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 20 9.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 20 9.5
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 83 SWSRRAFSKGRRGVTYVFENTDGTL 9
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 83 SWSRRAFSKGRRGVTYVFENTDGTL 9
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 83 SWSRRAFSKGRRGVTYVFENTDGTL 9
S++ + S + +TYV++N +GTL
Sbjct: 252 SFAIESISYEQTAITYVWKNDEGTL 276
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 83 SWSRRAFSKGRRGVTYVFENTDGTL 9
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 247 EPDDVEGHYLRTISWG 200
+PD E Y+RT+S G
Sbjct: 271 QPDTPEEKYIRTLSKG 286
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 20.6 bits (41), Expect = 5.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 184 TLEEKDPKRLFEGNALLR 237
T EEK P+ F G L R
Sbjct: 17 TPEEKRPRTAFSGEQLAR 34
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 100 EYGLRNKREVWRVKYTLARIRKAARELLTLE 192
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 100 EYGLRNKREVWRVKYTLARIRKAARELLTLE 192
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 100 EYGLRNKREVWRVKYTLARIRKAARELLTLE 192
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 100 EYGLRNKREVWRVKYTLARIRKAARELLTLE 192
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 100 EYGLRNKREVWRVKYTLARIRKAARELLTLE 192
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 100 EYGLRNKREVWRVKYTLARIRKAARELLTLE 192
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 100 EYGLRNKREVWRVKYTLARIRKAARELLTLE 192
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 100 EYGLRNKREVWRVKYTLARIRKAARELLTLE 192
E L+++REVW ++ R + + + LE
Sbjct: 33 EERLQHRREVWLIQQEREREHERLMKKMILE 63
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 19.8 bits (39), Expect = 9.5
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = -3
Query: 288 HNRVSSVFHPVPNTNQ 241
HN + ++F + +TN+
Sbjct: 56 HNHIQNIFKIIKSTNE 71
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 19.8 bits (39), Expect = 9.5
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = -3
Query: 288 HNRVSSVFHPVPNTNQ 241
HN + ++F + +TN+
Sbjct: 39 HNHIQNIFKIIKSTNE 54
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 19.8 bits (39), Expect = 9.5
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = -1
Query: 107 PYSPMIFNSW 78
PY +++NSW
Sbjct: 467 PYDHLVWNSW 476
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,867
Number of Sequences: 438
Number of extensions: 1533
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7812315
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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