Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30213.Seq
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q74LL4 Cluster: Putative uncharacterized protein; n=2; ...    36   0.84 
UniRef50_A3ZNC3 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q22VA0 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q15PK1 Cluster: Tryptophan halogenase; n=2; Alteromonad...    33   7.8  

>UniRef50_Q74LL4 Cluster: Putative uncharacterized protein; n=2;
           Lactobacillus|Rep: Putative uncharacterized protein -
           Lactobacillus johnsonii
          Length = 237

 Score = 36.3 bits (80), Expect = 0.84
 Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
 Frame = +2

Query: 578 KVITVLCVVMVLYVTGLSVSLGST------ETAVLQLGI*LYHYYLIMVWLHWGLGPWWR 739
           +++ +L +  + Y++G +  +G+       +T +L LG  L  YYL++    W   PW+R
Sbjct: 125 RLVMMLVLAYLAYISGFAALMGAEIFTVQGQTWLLILGFVLCVYYLVLAGSIWQ--PWFR 182

Query: 740 MWIIWLKL 763
            W  W+ +
Sbjct: 183 RWTSWIMI 190


>UniRef50_A3ZNC3 Cluster: Putative uncharacterized protein; n=1;
           Blastopirellula marina DSM 3645|Rep: Putative
           uncharacterized protein - Blastopirellula marina DSM
           3645
          Length = 253

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
 Frame = +1

Query: 580 SHNSTVCRYGIVCDWL-VRVAWIYGNSSFTTRDMT----IPLLFNYGLAP 714
           S+  T+ RYG+  DWL  R+AW YG+ S    D+     + L F  GL P
Sbjct: 60  SYPETLLRYGVWADWLEFRIAWNYGHQSSELDDIVGSEDLYLGFKIGLTP 109


>UniRef50_Q22VA0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 753

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +2

Query: 143 FNYQKKMESKYFMQTLNLTVKIY-RGVKGYHSLNFEKNTQQK--TFNCLNGVNL 295
           F YQ  MES++F Q +     I+ + +  Y  +NF    QQ     NC+  +N+
Sbjct: 79  FQYQNNMESQFFAQPIQNQANIHCQQIPNYQQMNFVNMQQQNYGIINCIYSLNI 132


>UniRef50_Q15PK1 Cluster: Tryptophan halogenase; n=2;
           Alteromonadales|Rep: Tryptophan halogenase -
           Pseudoalteromonas atlantica (strain T6c / BAA-1087)
          Length = 527

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 634 VAWIYGNSSFTTRDMTIPLLFNYGLAPLGPWALVENVDN 750
           V W++GN  F     T+PL   YG   L P+  VEN++N
Sbjct: 107 VDWVHGNGDFYYHPFTVPL--GYGRIDLAPY--VENIEN 141


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,487,536
Number of Sequences: 1657284
Number of extensions: 15345683
Number of successful extensions: 33875
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33847
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)