Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30213.Seq
         (767 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029934-1|ABM92808.1| 1442|Drosophila melanogaster IP14638p pro...    29   7.0  
AE013599-3499|AAF46925.1| 1439|Drosophila melanogaster CG3695-PA...    29   7.0  

>BT029934-1|ABM92808.1| 1442|Drosophila melanogaster IP14638p protein.
          Length = 1442

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +1

Query: 487  GPLITKIMSLKPNSLSPLSMFHSYVNIII*KSHNSTVCRY-GIVCDWLVRVAWIY-GN 654
            GP + +I   KPN+++ +++    +  I+ K H     +Y   +CD+L  + +I+ GN
Sbjct: 1245 GPFLQRIELEKPNAVAGIAVLLYEILEIVDKHHGPKPLQYMDQICDFLYHIKYIHVGN 1302


>AE013599-3499|AAF46925.1| 1439|Drosophila melanogaster CG3695-PA
            protein.
          Length = 1439

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +1

Query: 487  GPLITKIMSLKPNSLSPLSMFHSYVNIII*KSHNSTVCRY-GIVCDWLVRVAWIY-GN 654
            GP + +I   KPN+++ +++    +  I+ K H     +Y   +CD+L  + +I+ GN
Sbjct: 1243 GPFLQRIELEKPNAVAGIAVLLYEILEIVDKHHGPKPLQYMDQICDFLYHIKYIHVGN 1300


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,993,204
Number of Sequences: 53049
Number of extensions: 686980
Number of successful extensions: 1577
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)