Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30207.Seq
         (779 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    27   0.86 
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    26   1.5  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    25   2.6  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    25   3.5  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   4.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.0  

>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 439 IIYAWFTAMHQCPLEFNSHP-HIPPYK 516
           +++  FT   +CPL F+ HP   PP K
Sbjct: 1   MLFKLFTIPFRCPLFFSKHPKQFPPSK 27


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 82  ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 198
           +DA    K+    E+   E K+ PVKK P  K++  + N
Sbjct: 65  SDAREMMKKFKVGELIEAERKQIPVKKEPDWKMDQQDDN 103


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 290 ITVLRCIVAFFGSPFSAGESSGASSVPFSLPLLSAASTFLAGDFL 156
           I  L  ++       SA ++S    +P     + A STF+  DFL
Sbjct: 6   IATLTVLLVLLAGTASAKKASTIFGMPLQQDPVPATSTFIVSDFL 50


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 341 IKSHRFPLHTSLFLFCGITVLRCIVAFFG 255
           I  H F L T LF F  +T++  + A  G
Sbjct: 202 IIQHSFELSTFLFFFAPMTMITILYALIG 230


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 76  TMADAAVDKKEVAPEEVTSTEPKESPVKKSP 168
           T    AV      P E+  T+P  SP++ +P
Sbjct: 171 TNTTIAVQPAPTQPHELVGTDPLSSPLQAAP 201


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 178  VEAAESNGKENGTDEAPEDSPAENGEPKKAT 270
            ++ A+SNG E+G ++  ED   ++ +    T
Sbjct: 1812 LQHADSNGGEDGNEDDDEDDEDDDDDDDDTT 1842


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,867
Number of Sequences: 2352
Number of extensions: 12568
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)