Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30206.Seq
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   0.97 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.8  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 0.97
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 255 IELERGKEKIIFLYSTTTSITLVAAPTPSNKYYNSTSTKPVP 380
           +E  R  E ++ L  +T S +  + P+PS     ST+  P P
Sbjct: 108 VEYIRSLEDLLALDESTVSSSTSSIPSPSTTDDLSTNPTPPP 149


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 246 QLVDIVFLSTRNLLTPLNFINLVLLQLNIMVGKLLTH 136
           QLV I  L+T+   T  +F NL     ++M+  L T+
Sbjct: 329 QLVAIRLLNTKLQFTAKDFFNLDWTFCHMMIAALTTY 365


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -3

Query: 189 INLVLLQLNIMVGKLLTHSFTSYLMKVLISSINYYTPTLQNVCMY 55
           ++ ++ QLN   G +L   FTS+ + +++S        + N  M+
Sbjct: 222 LSKLIKQLNATYGLILLLMFTSHFIFIVVSIFYMSAYLISNPIMW 266


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 336 PSNKYYNSTSTKP 374
           PS+ YYN TS  P
Sbjct: 18  PSDNYYNYTSDIP 30


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 336 PSNKYYNSTSTKP 374
           PS+ YYN TS  P
Sbjct: 18  PSDNYYNYTSDIP 30


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 336 PSNKYYNSTSTKP 374
           PS+ YYN TS  P
Sbjct: 18  PSDNYYNYTSDIP 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,777
Number of Sequences: 336
Number of extensions: 2177
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)