BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= psV30206.Seq (533 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.1 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 3.4 DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 6.0 DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 6.0 AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 7.9 AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 7.9 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 23.8 bits (49), Expect = 1.1 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +3 Query: 297 STTTSITLVAAPTPSNKYYNSTSTKPVP 380 +TTT+ T T N N+++T P P Sbjct: 664 TTTTTTTTTTTTTTPNTTQNASATTPPP 691 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 22.2 bits (45), Expect = 3.4 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -2 Query: 439 DRTGRGRGRRH 407 DR GRGR R H Sbjct: 317 DRRGRGRSREH 327 >DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. Length = 630 Score = 21.4 bits (43), Expect = 6.0 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = -2 Query: 439 DRTGRGRGRRH 407 + TGRG+GR H Sbjct: 76 EETGRGKGRGH 86 >DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain protein protein. Length = 448 Score = 21.4 bits (43), Expect = 6.0 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 300 TTTSITLVAAPTPSNKYYNSTSTKPVPV 383 T SI + + T SNK YN T + V Sbjct: 71 TGESIVVAPSQTLSNKEYNMLRTTAINV 98 >AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A isoform protein. Length = 567 Score = 21.0 bits (42), Expect = 7.9 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 Query: 309 SITLVAAPTPSNKYYNSTSTKPVP 380 S+TLV A TP + ST+ P Sbjct: 29 SLTLVKAETPEHLAGTSTTAAATP 52 >AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase alpha 1 subunit protein. Length = 699 Score = 21.0 bits (42), Expect = 7.9 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +1 Query: 355 TQRQQNRCRSRAAVSARDDGG 417 T R N RSR A RDDGG Sbjct: 18 TSRGDND-RSRIARLGRDDGG 37 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 137,623 Number of Sequences: 438 Number of extensions: 2947 Number of successful extensions: 8 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15090993 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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