Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30203.Seq
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.0  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   1.4  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.2  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    24   5.5  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    24   5.5  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   9.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   9.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 10   HSILYNFSCPSTNFNTLNQYGRSKSASRRHWSTKRHPSLESSHH 141
            HS+ Y     +++F  +  Y ++        STKR P  E S++
Sbjct: 2079 HSLRYPMDSAASSFTLIYDYNKNGEVKSIKESTKRVPMFEFSYN 2122


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 234 CRHSTKRTRERCDFSAAATSKNSSTRDLPLAGFHGEVLPGGQRSLFILFTH 386
           C H T RT+   D SA     N+ +   P+   H     G    +++ FT+
Sbjct: 211 CNHYTHRTKVTSDISAGPCRTNTKSSSDPVLN-HDTTNTGIAEKVWLYFTN 260


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 367 YLFYSLIFMNVVPNLLILVPIFLFALLHAAS 459
           Y  ++L+FM ++P LLIL+  +L   +  +S
Sbjct: 349 YTTFTLVFMFIIP-LLILIGTYLSTFMTISS 378


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 367 YLFYSLIFMNVVPNLLILVPIFLFALLHAAS 459
           Y  ++L+FM ++P LLIL+  +L   +  +S
Sbjct: 350 YTTFTLVFMFIIP-LLILIGTYLSTFMTISS 379


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +1

Query: 289 HQRIPAREISLSRDFMAR--FFLEDSAHY---LFYSLIFMNVVPNLLILVPIFLFAL 444
           + R+ +R  SL R++  R   +L    ++   L+YSL+  NV  + L L+P  +  L
Sbjct: 82  YARVVSRVKSLQREYADRNPIYLNAGDNFQGTLWYSLLRWNVTAHFLNLLPADVMTL 138


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +1

Query: 289 HQRIPAREISLSRDFMAR--FFLEDSAHY---LFYSLIFMNVVPNLLILVPIFLFAL 444
           + R+ +R  SL R++  R   +L    ++   L+YSL+  NV  + L L+P  +  L
Sbjct: 82  YARVVSRVKSLQREYADRNPIYLNAGDNFQGTLWYSLLRWNVTAHFLNLLPADVMTL 138


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 103 STKRHPSLESSHHCQ*NRRSSLGGPRNHRAVYHWI 207
           S  R P +    H Q  RRSS    R  R+V +++
Sbjct: 60  SKNRMPPVPPPKHSQRRRRSSSPRTRQFRSVCYYV 94


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 463 NTKRRVAAQIKRLAPILTNWARRS*K*VNRINSERCPPGR 344
           N  +   A I+++ P   N  RRS +   R  S R PP R
Sbjct: 238 NIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPAR 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,725
Number of Sequences: 2352
Number of extensions: 16813
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)