Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30202.Seq
(801 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 184 1e-47
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 184 2e-47
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 184 2e-47
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 105 1e-23
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 103 4e-23
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 75 1e-14
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 37 0.003
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.009
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.009
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.020
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.036
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 32 0.11
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.25
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.25
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.58
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 28 1.3
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 27 3.1
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 4.1
SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 5.4
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 26 5.4
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 26 7.2
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 7.2
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 9.5
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 25 9.5
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 9.5
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 184 bits (448), Expect = 1e-47
Identities = 88/125 (70%), Positives = 101/125 (80%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPSYIKKIGYNPAAVAFV 614
QTREHALLA+TLGVKQLIV VNKMD + ++ ++IKK+G+NP V FV
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFV 189
Query: 615 PISGW 629
P+SG+
Sbjct: 190 PVSGF 194
Score = 144 bits (348), Expect = 2e-35
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAEREVGI 255
DKLKAERE GI
Sbjct: 61 DKLKAERERGI 71
Score = 39.9 bits (89), Expect = 4e-04
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 634 GDNMLEPSTKMXWFXGWQVERK 699
GDNM+EP+T M W+ GWQ E K
Sbjct: 196 GDNMIEPTTNMPWYQGWQKETK 217
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 184 bits (447), Expect = 2e-47
Identities = 87/125 (69%), Positives = 101/125 (80%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPSYIKKIGYNPAAVAFV 614
QTREHALLA+TLGVKQLIV VNKMD + ++ ++IKK+G+NP V FV
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFV 189
Query: 615 PISGW 629
P+SG+
Sbjct: 190 PVSGF 194
Score = 144 bits (348), Expect = 2e-35
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAEREVGI 255
DKLKAERE GI
Sbjct: 61 DKLKAERERGI 71
Score = 39.9 bits (89), Expect = 4e-04
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 634 GDNMLEPSTKMXWFXGWQVERK 699
GDNM+EP+T M W+ GWQ E K
Sbjct: 196 GDNMIEPTTNMPWYQGWQKETK 217
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 184 bits (447), Expect = 2e-47
Identities = 87/125 (69%), Positives = 101/125 (80%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPSYIKKIGYNPAAVAFV 614
QTREHALLA+TLGVKQLIV VNKMD + ++ ++IKK+G+NP V FV
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPFV 189
Query: 615 PISGW 629
P+SG+
Sbjct: 190 PVSGF 194
Score = 144 bits (348), Expect = 2e-35
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAEREVGI 255
DKLKAERE GI
Sbjct: 61 DKLKAERERGI 71
Score = 39.9 bits (89), Expect = 4e-04
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 634 GDNMLEPSTKMXWFXGWQVERK 699
GDNM+EP+T M W+ GWQ E K
Sbjct: 196 GDNMIEPTTNMPWYQGWQKETK 217
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 105 bits (251), Expect = 1e-23
Identities = 50/127 (39%), Positives = 79/127 (62%), Gaps = 2/127 (1%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + G
Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPSYIKKI-GYNPAA-VA 608
QTREHA+LA T G+ L+V +NKMD + ++ K +++++ GYN V
Sbjct: 363 QTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVK 422
Query: 609 FVPISGW 629
++P+S +
Sbjct: 423 YMPVSAY 429
Score = 82.2 bits (194), Expect = 8e-17
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 235 AEREVG 252
ERE G
Sbjct: 296 EEREKG 301
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 103 bits (246), Expect = 4e-23
Identities = 57/125 (45%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NG
Sbjct: 242 TMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENG 301
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPS--YIKKIGYNPAAVA 608
QTREHA L LG+ +++V VNK+D ++ S D + + S IK +G+ + V
Sbjct: 302 QTREHAYLLRALGISEIVVSVNKLDLMSW---SEDRFQEIKNIVSDFLIKMVGFKTSNVH 358
Query: 609 FVPIS 623
FVPIS
Sbjct: 359 FVPIS 363
Score = 74.5 bits (175), Expect = 2e-14
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 235 AEREVGI 255
ER G+
Sbjct: 235 EERARGV 241
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 74.9 bits (176), Expect = 1e-14
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+
Sbjct: 103 TISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP------- 155
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QTREH LLA +GVKQ++V +NK+D
Sbjct: 156 QTREHLLLARQVGVKQIVVYINKVD 180
Score = 35.1 bits (77), Expect = 0.012
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 135
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 476
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 477 KQLIVGVNKMD 509
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.020
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 449
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 247 VGI 255
GI
Sbjct: 111 KGI 113
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.036
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 31.9 bits (69), Expect = 0.11
Identities = 27/85 (31%), Positives = 39/85 (45%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI+ A F + +ID PGH DF + + D AV I+ + AG+
Sbjct: 80 TINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EA 132
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QT+ A G+ ++I VNKMD
Sbjct: 133 QTKVVWKQATKRGIPKVIF-VNKMD 156
Score = 28.7 bits (61), Expect = 1.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 270 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.7 bits (66), Expect = 0.25
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 473
Y + +ID+PGH DF + + + D A ++V A G I+ Q A+
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQ-------AWIDR 146
Query: 474 VKQLIVGVNKMDPL 515
+K ++V +NKMD L
Sbjct: 147 IKVILV-INKMDRL 159
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.58
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIV 389
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 251 PTSRSAFSLSNTQAYLKDPLPIS-WASFSNFSMVRLSIPPHL 129
PT+ + S + + Y+K P+P S ++S N S++ +PP +
Sbjct: 558 PTNVNYSSCVDPRTYVKTPIPFSKFSSSENLSLIPSLLPPSI 599
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 344 VLDEISVSRSINDGNIVLASFELPESNIDCIPTSRSAFSLSN 219
V D + SIN N++ A + +P + + +P+S +F L N
Sbjct: 87 VYDTLQELMSINSINMLYAFYYMPSGDEEKLPSSWKSFLLEN 128
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 309 IDAPGHRDFIKNMITGTSQADCAVLIV 389
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 140
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +2
Query: 461 FHPRCQTAHRRSKQNGSTEPPYSEPRFEEIKKEVSFIHQEDWLQPSCCRFRAHFW 625
FHP C + R G T YS +E ++ F+H W++ + C W
Sbjct: 35 FHP-CMYIYSR----GITNDTYSSDTYELDWYDLGFVHFSKWVELAWCFLTLATW 84
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 223 DKLKAEREVGIQSILLSGSSKLASTMLPS 309
D +KA RE+G+ + ++ G L ++ +PS
Sbjct: 66 DMIKAARELGLNAYVIPGEKLLDASEIPS 94
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 387 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGV-NKMDPLNHHTVSPDLRKSRRKY 563
+ G G+ ++ + Q++ +L ++ IV + M+ + HHT +LR + ++
Sbjct: 43 IMVGMGQKDSYVGDEAQSKR-GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 101
Query: 564 PSYIKKIGYNP 596
P + + NP
Sbjct: 102 PCLLTEAPLNP 112
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 25.8 bits (54), Expect = 7.2
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -2
Query: 383 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCIPTSRSAFSLSNTQAYL 204
EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 203 KDPLPI 186
K LPI
Sbjct: 62 KALLPI 67
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 258 IDIALWKFETSKYYV--TIIDAPGHRDFIKN 344
I+I + E +++ T+ID PG DFI N
Sbjct: 73 IEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 317 SINDGNIVLASFELPESNIDCIPTSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 138
S++ + L S+ P S + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 229 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 101
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,385,551
Number of Sequences: 5004
Number of extensions: 72654
Number of successful extensions: 278
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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