Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30200.Seq
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   4.8  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   4.8  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   4.8  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   4.8  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           23   8.4  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -1

Query: 680 TFLYSIGP-GLPPRRSTAKXATEKTALRWYN 591
           TF  S+ P GLP +  T K  T  T   W N
Sbjct: 144 TFSDSVQPVGLPKQDETVKDGTMTTVSGWGN 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,778
Number of Sequences: 2352
Number of extensions: 11975
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)