Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30199.Seq
(808 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;... 43 0.008
UniRef50_Q2U2J5 Cluster: Predicted protein; n=1; Aspergillus ory... 40 0.074
UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gamb... 37 0.69
UniRef50_Q5JVS0-2 Cluster: Isoform 2 of Q5JVS0 ; n=2; Catarrhini... 36 0.91
UniRef50_Q5JVS0 Cluster: Intracellular hyaluronan-binding protei... 36 0.91
UniRef50_A7SVP8 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.1
UniRef50_Q9I9R0 Cluster: Intracellular hyaluronan-binding protei... 35 2.1
UniRef50_Q6GLG8 Cluster: Hyaluronan binding protein 4; n=2; Xeno... 35 2.8
UniRef50_Q4Q764 Cluster: ATP-dependent DEAD/H DNA helicase recQ ... 35 2.8
UniRef50_A5DE38 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_UPI0000E23714 Cluster: PREDICTED: hypothetical protein,... 34 3.7
UniRef50_Q6PB22 Cluster: MGC68500 protein; n=2; Xenopus laevis|R... 34 3.7
UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intro... 34 4.8
UniRef50_Q8AV21 Cluster: IHABP; n=2; Tetraodontidae|Rep: IHABP -... 34 4.8
UniRef50_Q8T4R5 Cluster: Putative mRNA binding protein; n=5; Aed... 34 4.8
UniRef50_Q7SB65 Cluster: Putative uncharacterized protein NCU062... 34 4.8
UniRef50_Q2TY93 Cluster: Predicted protein; n=1; Aspergillus ory... 34 4.8
UniRef50_Q2GSB9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_UPI00006CCCD3 Cluster: hypothetical protein TTHERM_0033... 33 6.4
UniRef50_Q0LL43 Cluster: Putative uncharacterized protein; n=2; ... 33 6.4
UniRef50_Q0AS26 Cluster: Pseudouridine synthase; n=1; Maricaulis... 33 6.4
UniRef50_Q2KFA9 Cluster: Putative uncharacterized protein; n=5; ... 33 6.4
UniRef50_Q8NC51 Cluster: Plasminogen activator inhibitor 1 RNA-b... 33 6.4
UniRef50_UPI000155BB23 Cluster: PREDICTED: hypothetical protein;... 33 8.5
UniRef50_UPI000023F071 Cluster: hypothetical protein FG07834.1; ... 33 8.5
UniRef50_UPI000023E5E4 Cluster: hypothetical protein FG11436.1; ... 33 8.5
UniRef50_Q7X2V2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_A6C5H6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_Q7YR37 Cluster: ATP-binding cassette sub-family F membe... 33 8.5
UniRef50_Q8NE71 Cluster: ATP-binding cassette sub-family F membe... 33 8.5
>UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG4170-PA - Nasonia vitripennis
Length = 437
Score = 43.2 bits (97), Expect = 0.008
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 219
MEN+Y + V N+++L LD++ DPL+ LK REQ
Sbjct: 1 MENTYSITVTNKFSLALDEDEDPLEILKLREQ 32
>UniRef50_Q2U2J5 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 321
Score = 39.9 bits (89), Expect = 0.074
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQKGK 383
KS +AG+G +K ++++K + KP+PKP K +T +K K+T+ ++ IK+ + +
Sbjct: 83 KSTKAGKGTKKTTKKAKKSSTAKPKPKPRKQLT-EKQKEAKKTRELRD-QIKALKATALE 140
Query: 384 GPAR 395
P R
Sbjct: 141 APKR 144
>UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000009724 - Anopheles gambiae
str. PEST
Length = 445
Score = 36.7 bits (81), Expect = 0.69
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 124 MEN-SYGVGVVNRYALFL--DDETDPLDALKAREQ 219
MEN SYG+ V NRY LF DDE DP++A+ +Q
Sbjct: 1 MENTSYGINVANRYDLFCIDDDEGDPIEAILKSKQ 35
>UniRef50_Q5JVS0-2 Cluster: Isoform 2 of Q5JVS0 ; n=2;
Catarrhini|Rep: Isoform 2 of Q5JVS0 - Homo sapiens
(Human)
Length = 308
Score = 36.3 bits (80), Expect = 0.91
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 219
M+ S+G V NR+ LDDE+DP D L+ E+
Sbjct: 16 MQESFGCVVANRFHQLLDDESDPFDILREAER 47
>UniRef50_Q5JVS0 Cluster: Intracellular hyaluronan-binding protein
4; n=14; Eutheria|Rep: Intracellular hyaluronan-binding
protein 4 - Homo sapiens (Human)
Length = 413
Score = 36.3 bits (80), Expect = 0.91
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 219
M+ S+G V NR+ LDDE+DP D L+ E+
Sbjct: 16 MQESFGCVVANRFHQLLDDESDPFDILREAER 47
>UniRef50_A7SVP8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 489
Score = 35.1 bits (77), Expect = 2.1
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +3
Query: 216 AGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHD----IKSGEQQKGK 383
A +KE ++ RK+++GKP+P+ K PTRK +K+ ++ + IKS ++K +
Sbjct: 293 ATSNEKKEQEKERKKSEGKPKPRSEK-EKQPTRKRVKKFESSDEEEDEQPIKSKSEKKSR 351
>UniRef50_Q9I9R0 Cluster: Intracellular hyaluronan-binding protein
4; n=2; Gallus gallus|Rep: Intracellular
hyaluronan-binding protein 4 - Gallus gallus (Chicken)
Length = 357
Score = 35.1 bits (77), Expect = 2.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 219
ME S+ V NR+ LDDE+DP D L+ E+
Sbjct: 14 MEGSFSCTVANRFYQLLDDESDPFDNLREAER 45
>UniRef50_Q6GLG8 Cluster: Hyaluronan binding protein 4; n=2; Xenopus
tropicalis|Rep: Hyaluronan binding protein 4 - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 339
Score = 34.7 bits (76), Expect = 2.8
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDAL 204
M++++G V NR+ LDDE+DPLD L
Sbjct: 1 MQDNFGCAVENRFNQLLDDESDPLDFL 27
>UniRef50_Q4Q764 Cluster: ATP-dependent DEAD/H DNA helicase recQ
family-like protein; n=3; Leishmania|Rep: ATP-dependent
DEAD/H DNA helicase recQ family-like protein - Leishmania
major
Length = 1003
Score = 34.7 bits (76), Expect = 2.8
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 307 PPGRALRKLKM*SLMTSKVENNR-RVRDLHARSIVMLSVRLRVVVKIGR 450
PPGR L K+K SL+ + VE NR R+ + +L +R R +++ G+
Sbjct: 910 PPGRGLGKMKAVSLVNAFVEENRLRIHSTYEALRALLGIRPRSLIQHGK 958
>UniRef50_A5DE38 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1397
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGK--PEPKPAKGVTVPTRKGIKETQN--VKSHDIKSGEQ 371
K+ E K + +S+ E K K P PKP K PT+ + T+N K I ++
Sbjct: 885 KAKPKSEPKSKSEPKSKSEPKAKSEPRPKPEKSKPKPTKPKTESTENGTTKVARIPKKKE 944
Query: 372 QKGKGP 389
K +GP
Sbjct: 945 SKAEGP 950
>UniRef50_UPI0000E23714 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 193
Score = 34.3 bits (75), Expect = 3.7
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 219 GEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQKGK 383
GEG ++E++R RKE + K E K K + +E + K + K E++K K
Sbjct: 63 GEGEEEEERRGRKEGEKKEEKKEEKRRKKKEERKKEERKEKKKEEKKKEEKKKEK 117
>UniRef50_Q6PB22 Cluster: MGC68500 protein; n=2; Xenopus laevis|Rep:
MGC68500 protein - Xenopus laevis (African clawed frog)
Length = 404
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDAL 204
M++++G V NR+ LDDE+DPLD L
Sbjct: 18 MQDNFGCAVGNRFHQLLDDESDPLDFL 44
>UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intronic
gene CG4170-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to vasa intronic gene CG4170-PA,
isoform A - Apis mellifera
Length = 414
Score = 33.9 bits (74), Expect = 4.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDALKARE 216
MEN Y + V N+++L L D+ DP + L+ E
Sbjct: 1 MENMYSIAVTNKFSLALGDDEDPHEKLREEE 31
>UniRef50_Q8AV21 Cluster: IHABP; n=2; Tetraodontidae|Rep: IHABP -
Fugu rubripes (Japanese pufferfish) (Takifugu rubripes)
Length = 361
Score = 33.9 bits (74), Expect = 4.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDALKAREQ 219
+ +++G V NR+ LDD+ DPLD L E+
Sbjct: 2 LPDAFGCAVANRFGNLLDDDADPLDLLSEAEK 33
>UniRef50_Q8T4R5 Cluster: Putative mRNA binding protein; n=5; Aedes
aegypti|Rep: Putative mRNA binding protein - Aedes
aegypti (Yellowfever mosquito)
Length = 419
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 124 MEN-SYGVGVVNRYALF-LDDE-TDPLDALKAREQ 219
MEN SYG+ V NRY LF +DDE DP + + ++Q
Sbjct: 1 MENTSYGINVANRYDLFSIDDEGDDPFETITQKKQ 35
>UniRef50_Q7SB65 Cluster: Putative uncharacterized protein
NCU06276.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU06276.1 - Neurospora crassa
Length = 856
Score = 33.9 bits (74), Expect = 4.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 213 RAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQKGK 383
+ G G + + KP+PKP + +++ T + IK + D KS Q++G+
Sbjct: 274 QCGTGGVPSVASGKSKVAPKPKPKPRRDISLSTVESIKSSTGAMGRDGKSSNQEQGE 330
>UniRef50_Q2TY93 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 628
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKP-EPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQKG 380
++ AG GA K+ + +K + K EP+ + +K+ + +K DIK E+ K
Sbjct: 504 EAQEAGAGAAKQPEEIQKPEEAKTKEPRAVQDAQEEGAATVKKPEELKPEDIKKPEEAKT 563
Query: 381 KGP 389
K P
Sbjct: 564 KEP 566
>UniRef50_Q2GSB9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 635
Score = 33.9 bits (74), Expect = 4.8
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 213 RAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQKGKGPA 392
R E KE++ +KE + + E K K R K +N KS D SGE++ G P+
Sbjct: 468 REAEKKAKEEEEKKKEEEEEKEKKKEKKGGKKKRASKKSKKN-KSKDAGSGEEESGSEPS 526
>UniRef50_UPI00006CCCD3 Cluster: hypothetical protein
TTHERM_00339950; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00339950 - Tetrahymena
thermophila SB210
Length = 435
Score = 33.5 bits (73), Expect = 6.4
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPE-PKPAKGVTVPT-----RKGIKETQNVKSHDIKSG 365
K + GE QK+D +++K+NK K + K +G+ + T +K TQN+ D+K
Sbjct: 180 KQNKEGE-EQKQDTKNKKKNKKKEQKSKLPQGILIGTSDSSNQKANSSTQNINQSDVKQP 238
Query: 366 EQQK 377
E K
Sbjct: 239 ENTK 242
>UniRef50_Q0LL43 Cluster: Putative uncharacterized protein; n=2;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 253
Score = 33.5 bits (73), Expect = 6.4
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 141 CGSSEQIRSFLGR*DRSS*CVKSARAGEGAQKEDQRSRK--ENKGKPEPKPAKG 296
CGS I+S+ GR + C S E A+K+ R R+ E KP P PA+G
Sbjct: 33 CGSEATIQSYPGR--TPTLC--SPECAEAARKDHDRQRRAAERANKPAPAPARG 82
>UniRef50_Q0AS26 Cluster: Pseudouridine synthase; n=1; Maricaulis
maris MCS10|Rep: Pseudouridine synthase - Maricaulis
maris (strain MCS10)
Length = 372
Score = 33.5 bits (73), Expect = 6.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 201 VKSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQKG 380
++ AR G + R+R+ GKP KPA G P R ++ + ++G +K
Sbjct: 299 IEDARKGRPLDAKSTRARRGKDGKPTAKPAAGRAAP-RATTSRSETPRPDTPRTGGPRKP 357
Query: 381 KGP 389
GP
Sbjct: 358 GGP 360
>UniRef50_Q2KFA9 Cluster: Putative uncharacterized protein; n=5;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea 70-15
Length = 446
Score = 33.5 bits (73), Expect = 6.4
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 210 ARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSG 365
A + A+ +D + K KP+P PA VP +K I +T+ K +K+G
Sbjct: 290 AASNHDAEGDDDTTTAPKKKKPKPSPAIAAAVP-KKVILKTKGPKKEKVKTG 340
>UniRef50_Q8NC51 Cluster: Plasminogen activator inhibitor 1
RNA-binding protein; n=54; Euteleostomi|Rep: Plasminogen
activator inhibitor 1 RNA-binding protein - Homo sapiens
(Human)
Length = 408
Score = 33.5 bits (73), Expect = 6.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 124 MENSYGVGVVNRYALFLDDETDPLDALKARE 216
++ +G V NR+ DDE+DP + LKA E
Sbjct: 5 LQEGFGCVVTNRFDQLFDDESDPFEVLKAAE 35
>UniRef50_UPI000155BB23 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 173
Score = 33.1 bits (72), Expect = 8.5
Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +3
Query: 216 AGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGI-KETQNVKSHDI-KSGEQQKGKGP 389
AG G KE++R KE KGK E + KG+ KG KE + K + GE KG
Sbjct: 24 AGRGDLKEEERG-KEEKGKKEGEEEKGMGEKGEKGDGKEGKGKKGGGKGEKGEGMGEKGE 82
Query: 390 ARTXXXXXXXXXXXXXXXXXQNGTAEKKEGAPRTTETR 503
+ G E KEG R E R
Sbjct: 83 KGDGKEEKGKKGDGEEGRDGKEGKGEGKEGKERRWEGR 120
>UniRef50_UPI000023F071 Cluster: hypothetical protein FG07834.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07834.1 - Gibberella zeae PH-1
Length = 394
Score = 33.1 bits (72), Expect = 8.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 213 RAGEGAQKEDQRSRKENKGKPEPKPAKGV-TVPTRKGIKETQNVKSHDIKSGEQQKGK 383
R G A + D+R +K++ KP P+P K TRK +K + K + GK
Sbjct: 128 RRGSSATQPDRRRQKQSPAKPGPEPTKSARRASTRKTLKAEPTATAASEKPRRGRMGK 185
>UniRef50_UPI000023E5E4 Cluster: hypothetical protein FG11436.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG11436.1 - Gibberella zeae PH-1
Length = 326
Score = 33.1 bits (72), Expect = 8.5
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 240 DQRSRKENKGKPEPKPAKGVTVP--TRKGIKETQNVKSHDIKSGEQQKGKGPAR 395
+Q+ +K++ KP+PKP T P R+G + K HD KS ++ K K P +
Sbjct: 266 EQKPKKQSADKPKPKPKAPTTPPHVQRRGQPPVEQ-KPHD-KSADKPKPKTPTK 317
>UniRef50_Q7X2V2 Cluster: Putative uncharacterized protein; n=1;
uncultured Acidobacteria bacterium|Rep: Putative
uncharacterized protein - uncultured Acidobacteria
bacterium
Length = 212
Score = 33.1 bits (72), Expect = 8.5
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 612 RDRAGRVLLTIEANVSSTEDSGSDKNRCEISSTRREGPGXHNLGAHSRXIXTX*TKTGFL 791
R AG +LLTI A S D ++KN+ + + ++E G + I +K F+
Sbjct: 3 RHLAGIILLTIAALTYSCADPSTNKNKATVGAAQQESNSPKPTGTEALVISPENSKVEFV 62
Query: 792 RGEIT 806
++T
Sbjct: 63 ASKVT 67
>UniRef50_A6C5H6 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 594
Score = 33.1 bits (72), Expect = 8.5
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAK-GVTVPTRKGIKETQNVKSHDIKSGEQQKG 380
+ ++ G+ K D S+K +K + + KP + G + P +KG +E ++ D +SGEQQ+
Sbjct: 240 QKSQEGKSDSKSDADSKKSSKSESQGKPPENGKSDPDQKGSEEQKS----DQQSGEQQQS 295
Query: 381 K 383
+
Sbjct: 296 Q 296
>UniRef50_Q7YR37 Cluster: ATP-binding cassette sub-family F member
1; n=30; Eumetazoa|Rep: ATP-binding cassette sub-family
F member 1 - Pan troglodytes (Chimpanzee)
Length = 807
Score = 33.1 bits (72), Expect = 8.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 237 EDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQKGKGPAR 395
+DQ +E + K PKPAK K + E Q K G+++K KG A+
Sbjct: 137 QDQSEEEEEEEKHPPKPAKPEKNRINKAVSEEQQPALKG-KKGKEEKSKGKAK 188
>UniRef50_Q8NE71 Cluster: ATP-binding cassette sub-family F member
1; n=18; Tetrapoda|Rep: ATP-binding cassette sub-family
F member 1 - Homo sapiens (Human)
Length = 845
Score = 33.1 bits (72), Expect = 8.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 237 EDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQKGKGPAR 395
+DQ +E + K PKPAK K + E Q K G+++K KG A+
Sbjct: 137 QDQSEEEEEEEKHPPKPAKPEKNRINKAVSEEQQPALKG-KKGKEEKSKGKAK 188
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,611,494
Number of Sequences: 1657284
Number of extensions: 13756248
Number of successful extensions: 36962
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36827
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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