Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30199.Seq
         (808 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051984-1|AAK93408.1|  838|Drosophila melanogaster LD45365p pro...    32   0.80 
AF220364-1|AAF37265.1|  838|Drosophila melanogaster Plenty of SH...    32   0.80 
AE013599-2508|AAF57833.1|  838|Drosophila melanogaster CG4909-PA...    32   0.80 
AY051891-1|AAK93315.1|  561|Drosophila melanogaster LD37788p pro...    30   3.2  
AE014297-4170|AAF56741.1|  761|Drosophila melanogaster CG12878-P...    30   3.2  
AE014297-4169|AAN14126.2|  782|Drosophila melanogaster CG12878-P...    30   3.2  
BT014670-1|AAT27294.1|  184|Drosophila melanogaster AT17982p pro...    29   7.5  

>AY051984-1|AAK93408.1|  838|Drosophila melanogaster LD45365p
           protein.
          Length = 838

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 15/58 (25%), Positives = 33/58 (56%)
 Frame = +3

Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQK 377
           ++A AG+G +K ++   +  + KP+P PA+ V  P  + ++   + +SH     +Q++
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134


>AF220364-1|AAF37265.1|  838|Drosophila melanogaster Plenty of SH3s
           protein.
          Length = 838

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 15/58 (25%), Positives = 33/58 (56%)
 Frame = +3

Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQK 377
           ++A AG+G +K ++   +  + KP+P PA+ V  P  + ++   + +SH     +Q++
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134


>AE013599-2508|AAF57833.1|  838|Drosophila melanogaster CG4909-PA
           protein.
          Length = 838

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 15/58 (25%), Positives = 33/58 (56%)
 Frame = +3

Query: 204 KSARAGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQNVKSHDIKSGEQQK 377
           ++A AG+G +K ++   +  + KP+P PA+ V  P  + ++   + +SH     +Q++
Sbjct: 78  QNAAAGKGEEKGEETETQPERAKPQP-PAESVAPPDNQLLQLQSHQQSHQPARHKQRR 134


>AY051891-1|AAK93315.1|  561|Drosophila melanogaster LD37788p
           protein.
          Length = 561

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 557 PGRCRASRFHQDHR-VSLREGPRGPRSFDNRGKREFDRRFRL*QKP 691
           PGR     F +++R   LRE  RGP   DNR ++    R    Q+P
Sbjct: 164 PGRQNGMEFKKNNRGQQLRERERGPDQLDNRNQKPSTPRSNQQQQP 209


>AE014297-4170|AAF56741.1|  761|Drosophila melanogaster CG12878-PA,
           isoform A protein.
          Length = 761

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 557 PGRCRASRFHQDHR-VSLREGPRGPRSFDNRGKREFDRRFRL*QKP 691
           PGR     F +++R   LRE  RGP   DNR ++    R    Q+P
Sbjct: 364 PGRQNGMEFKKNNRGQQLRERERGPDQLDNRNQKPSTPRSNQQQQP 409


>AE014297-4169|AAN14126.2|  782|Drosophila melanogaster CG12878-PB,
           isoform B protein.
          Length = 782

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 557 PGRCRASRFHQDHR-VSLREGPRGPRSFDNRGKREFDRRFRL*QKP 691
           PGR     F +++R   LRE  RGP   DNR ++    R    Q+P
Sbjct: 385 PGRQNGMEFKKNNRGQQLRERERGPDQLDNRNQKPSTPRSNQQQQP 430


>BT014670-1|AAT27294.1|  184|Drosophila melanogaster AT17982p
           protein.
          Length = 184

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 682 SEPESSVELTFASIVKRTRPARSLTKAHAVVLVEPRRS 569
           S  +  + L+ AS   R RPAR +TK   V+  +PR+S
Sbjct: 71  SGKKHKMHLSKASTYGRKRPARKVTKRRDVINKKPRKS 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,042,126
Number of Sequences: 53049
Number of extensions: 662400
Number of successful extensions: 2066
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)