Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30192.Seq
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 165 1e-40
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 165 1e-40
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 165 1e-40
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 165 1e-40
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 165 1e-40
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 165 1e-40
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 165 1e-40
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 165 1e-40
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 162 2e-39
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 160 6e-39
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 152 2e-36
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 9e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 36 0.22
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 36 0.22
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 36 0.22
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 36 0.22
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 36 0.22
AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7 p... 34 0.51
AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transpor... 34 0.51
AB055390-1|BAB62294.1| 2008|Homo sapiens ABCA-SSN protein. 34 0.51
AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member ... 33 0.89
AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens ... 33 1.2
BC062576-1|AAH62576.1| 120|Homo sapiens LOC124216 protein protein. 32 2.7
BC111952-1|AAI11953.1| 120|Homo sapiens LOC124216 protein protein. 31 3.6
BC093998-1|AAH93998.1| 120|Homo sapiens LOC124216 protein protein. 31 3.6
AK096394-1|BAC04775.1| 120|Homo sapiens protein ( Homo sapiens ... 31 3.6
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 30 8.3
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 30 8.3
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 30 8.3
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 30 8.3
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 165 bits (402), Expect = 1e-40
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180
Score = 158 bits (383), Expect = 2e-38
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVRIGVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGK 91
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 165 bits (402), Expect = 1e-40
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180
Score = 158 bits (383), Expect = 2e-38
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVRIGVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGK 91
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 165 bits (402), Expect = 1e-40
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180
Score = 158 bits (383), Expect = 2e-38
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVRIGVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGK 91
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 165 bits (402), Expect = 1e-40
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180
Score = 158 bits (383), Expect = 2e-38
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVRIGVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGK 91
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 165 bits (402), Expect = 1e-40
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180
Score = 158 bits (383), Expect = 2e-38
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVRIGVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGK 91
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 165 bits (402), Expect = 1e-40
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180
Score = 158 bits (383), Expect = 2e-38
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVRIGVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGK 91
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 165 bits (402), Expect = 1e-40
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180
Score = 158 bits (383), Expect = 2e-38
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVRIGVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGK 91
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 165 bits (402), Expect = 1e-40
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPYGGGRPGRVKRKNAKK 180
Score = 158 bits (383), Expect = 2e-38
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVRIGVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGK 91
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 162 bits (393), Expect = 2e-39
Identities = 76/90 (84%), Positives = 83/90 (92%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL SP+GGGRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLCSPYGGGRPGRVKRKNAKK 180
Score = 144 bits (348), Expect = 4e-34
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALL RLV IGVLDE +
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGK 91
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 160 bits (388), Expect = 6e-39
Identities = 76/90 (84%), Positives = 83/90 (92%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 91 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSAR 526
LDS KHIDFSL+SP G GRPGRVK + + +
Sbjct: 151 LDSQKHIDFSLRSPTGVGRPGRVKRKNAKK 180
Score = 157 bits (381), Expect = 4e-38
Identities = 73/84 (86%), Positives = 81/84 (96%)
Frame = +3
Query: 9 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 188
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 189 PKRLFEGNALLRRLVRIGVLDENR 260
P+RLFEGNALLRRLVR+GVLDE +
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGK 91
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 152 bits (368), Expect = 2e-36
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = +2
Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
+MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 30 KMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 89
Query: 437 LDSGKHIDFSLKSPFGGG 490
LDS KHIDFSL+SP+GGG
Sbjct: 90 LDSQKHIDFSLRSPYGGG 107
Score = 50.0 bits (114), Expect = 1e-05
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +3
Query: 183 KDPKRLFEGNALLRRLVRIGVLDENR 260
+DP+RLFEGNALLRRLVRIGVLDE +
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGK 30
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 9e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +3
Query: 18 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 197
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 198 LFE 206
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 299 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 433
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 35.1 bits (77), Expect = 0.29
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 69 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 248
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 299 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 433
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 35.1 bits (77), Expect = 0.29
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 69 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 248
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 299 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 433
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 35.1 bits (77), Expect = 0.29
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 69 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 248
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 299 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 433
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 35.1 bits (77), Expect = 0.29
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 69 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 248
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 299 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 433
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Score = 35.1 bits (77), Expect = 0.29
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 69 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 248
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
>AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7
protein.
Length = 2146
Score = 34.3 bits (75), Expect = 0.51
Identities = 28/103 (27%), Positives = 43/103 (41%)
Frame = -3
Query: 544 ALRHPVPCGGSSLDTSRTTSTEWRFQREVNVLARVQAHNK*WDVHNLLADTNMPLPDQNS 365
AL P+P G +LD T W + ++ +NK W H+++A N N+
Sbjct: 1441 ALLSPLP--GGALDRVLKNLTAWAHSLDAQDSLKIWFNNKGW--HSMVAFVNRA---SNA 1493
Query: 364 GMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFSSSTPI 236
+ L H TTL LNL + + E L +SS +
Sbjct: 1494 ILRAHLPPGPARHAHSITTLNHPLNLTKEQLFEAALMASSVDV 1536
>AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transporter
protein.
Length = 2146
Score = 34.3 bits (75), Expect = 0.51
Identities = 28/103 (27%), Positives = 43/103 (41%)
Frame = -3
Query: 544 ALRHPVPCGGSSLDTSRTTSTEWRFQREVNVLARVQAHNK*WDVHNLLADTNMPLPDQNS 365
AL P+P G +LD T W + ++ +NK W H+++A N N+
Sbjct: 1441 ALLSPLP--GGALDRVLKNLTAWAHSLDAQDSLKIWFNNKGW--HSMVAFVNRA---SNA 1493
Query: 364 GMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFSSSTPI 236
+ L H TTL LNL + + E L +SS +
Sbjct: 1494 ILRAHLPPGRARHAHSITTLNHPLNLTKEQLFEAALMASSVDV 1536
>AB055390-1|BAB62294.1| 2008|Homo sapiens ABCA-SSN protein.
Length = 2008
Score = 34.3 bits (75), Expect = 0.51
Identities = 28/103 (27%), Positives = 43/103 (41%)
Frame = -3
Query: 544 ALRHPVPCGGSSLDTSRTTSTEWRFQREVNVLARVQAHNK*WDVHNLLADTNMPLPDQNS 365
AL P+P G +LD T W + ++ +NK W H+++A N N+
Sbjct: 1303 ALLSPLP--GGALDRVLKNLTAWAHSLDAQDSLKIWFNNKGW--HSMVAFVNRA---SNA 1355
Query: 364 GMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFSSSTPI 236
+ L H TTL LNL + + E L +SS +
Sbjct: 1356 ILRAHLPPGRARHAHSITTLNHPLNLTKEQLFEAALMASSVDV 1398
>AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member 7
protein.
Length = 2146
Score = 33.5 bits (73), Expect = 0.89
Identities = 28/103 (27%), Positives = 43/103 (41%)
Frame = -3
Query: 544 ALRHPVPCGGSSLDTSRTTSTEWRFQREVNVLARVQAHNK*WDVHNLLADTNMPLPDQNS 365
AL P+P G +LD T W + ++ +NK W H+++A N N+
Sbjct: 1441 ALLSPLP--GGALDRVLKNLTAWAHSLDAQDSLKIWFNNKGW--HSMVAFVNRA---SNA 1493
Query: 364 GMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFSSSTPI 236
+ L H TTL LNL + + E L +SS +
Sbjct: 1494 ILRAHLPPGPARHAHSITTLNHPLNLTKEQLSEAALMASSVDV 1536
>AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ46249 fis, clone TESTI4021377. ).
Length = 222
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 388 YSCPQASCEHPIIYCAPGLWQAH*LLSEISIRWRSSWTCQG 510
+SCP A P+ + PG W +S W +W CQG
Sbjct: 139 WSCPYAGLTVPLPWLWPGPWPYSDPAMTLSWPWPGTWPCQG 179
>BC062576-1|AAH62576.1| 120|Homo sapiens LOC124216 protein protein.
Length = 120
Score = 31.9 bits (69), Expect = 2.7
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 552 HHWRSATLSLAEVLPL-TRPGRPPP 481
HHW A +S E+LP+ PGRP P
Sbjct: 57 HHWADAAVSGPEILPVPLEPGRPQP 81
>BC111952-1|AAI11953.1| 120|Homo sapiens LOC124216 protein protein.
Length = 120
Score = 31.5 bits (68), Expect = 3.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 552 HHWRSATLSLAEVLPL-TRPGRPPP 481
HHW A +S E+LP+ PGRP P
Sbjct: 57 HHWADAAVSGPEILPVPLEPGRPRP 81
>BC093998-1|AAH93998.1| 120|Homo sapiens LOC124216 protein protein.
Length = 120
Score = 31.5 bits (68), Expect = 3.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 552 HHWRSATLSLAEVLPL-TRPGRPPP 481
HHW A +S E+LP+ PGRP P
Sbjct: 57 HHWADAAVSGPEILPVPLEPGRPRP 81
>AK096394-1|BAC04775.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ39075 fis, clone NT2RP7016911. ).
Length = 120
Score = 31.5 bits (68), Expect = 3.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 552 HHWRSATLSLAEVLPL-TRPGRPPP 481
HHW A +S E+LP+ PGRP P
Sbjct: 57 HHWADAAVSGPEILPVPLEPGRPRP 81
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 30.3 bits (65), Expect = 8.3
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -1
Query: 207 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 49
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 48 QKDDEVSRTSLKIPTV 1
KD+ ++ S +P V
Sbjct: 1057 MKDNFLTSVSYSLPIV 1072
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 30.3 bits (65), Expect = 8.3
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -1
Query: 207 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 49
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738
Query: 48 QKDDEVSRTSLKIPTV 1
KD+ ++ S +P V
Sbjct: 739 MKDNFLTSVSYSLPIV 754
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 30.3 bits (65), Expect = 8.3
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -1
Query: 207 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 49
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808
Query: 48 QKDDEVSRTSLKIPTV 1
KD+ ++ S +P V
Sbjct: 809 MKDNFLTSVSYSLPIV 824
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 30.3 bits (65), Expect = 8.3
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = -1
Query: 207 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 49
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 48 QKDDEVSRTSLKIPTV 1
KD+ ++ S +P V
Sbjct: 1057 MKDNFLTSVSYSLPIV 1072
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,657,858
Number of Sequences: 237096
Number of extensions: 2097771
Number of successful extensions: 5146
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5146
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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