Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30192.Seq
         (792 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   167   1e-41
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   167   1e-41
AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   166   3e-41
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   166   3e-41
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...   133   2e-31
AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p pro...    33   0.45 
AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA...    33   0.45 
AY069336-1|AAL39481.1|  258|Drosophila melanogaster LD05259p pro...    29   5.5  
AE014297-401|AAF51920.1|  258|Drosophila melanogaster CG10287-PA...    29   5.5  
AF070734-1|AAD09748.1|  218|Drosophila melanogaster Gasp precurs...    29   7.3  
BT001789-1|AAN71544.1|   51|Drosophila melanogaster RH23912p pro...    29   9.6  
AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-P...    29   9.6  

>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  167 bits (407), Expect = 1e-41
 Identities = 79/92 (85%), Positives = 86/92 (93%)
 Frame = +2

Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
           +MKLDYVLGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF+VR
Sbjct: 92  RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 151

Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSARDR 532
           LDS KHIDFSLKSPFGGGRPGRVK +   +++
Sbjct: 152 LDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQ 183



 Score =  166 bits (404), Expect = 3e-41
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = +3

Query: 3   PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 182
           PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELLTL+E
Sbjct: 7   PSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDE 66

Query: 183 KDPKRLFEGNALLRRLVRIGVLDENR 260
           KD KRLF+GNALLRRLVRIGVLDE+R
Sbjct: 67  KDEKRLFQGNALLRRLVRIGVLDESR 92


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  167 bits (407), Expect = 1e-41
 Identities = 79/92 (85%), Positives = 86/92 (93%)
 Frame = +2

Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 436
           +MKLDYVLGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF+VR
Sbjct: 92  RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVR 151

Query: 437 LDSGKHIDFSLKSPFGGGRPGRVKGRTSARDR 532
           LDS KHIDFSLKSPFGGGRPGRVK +   +++
Sbjct: 152 LDSQKHIDFSLKSPFGGGRPGRVKRKNLKKNQ 183



 Score =  166 bits (404), Expect = 3e-41
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = +3

Query: 3   PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 182
           PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELLTL+E
Sbjct: 7   PSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDE 66

Query: 183 KDPKRLFEGNALLRRLVRIGVLDENR 260
           KD KRLF+GNALLRRLVRIGVLDE+R
Sbjct: 67  KDEKRLFQGNALLRRLVRIGVLDESR 92


>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  166 bits (404), Expect = 3e-41
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = +3

Query: 3   PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 182
           PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELLTL+E
Sbjct: 7   PSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDE 66

Query: 183 KDPKRLFEGNALLRRLVRIGVLDENR 260
           KD KRLF+GNALLRRLVRIGVLDE+R
Sbjct: 67  KDEKRLFQGNALLRRLVRIGVLDESR 92



 Score = 92.3 bits (219), Expect = 7e-19
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +2

Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 394
           +MKLDYVLGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIR
Sbjct: 92  RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  166 bits (404), Expect = 3e-41
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = +3

Query: 3   PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 182
           PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELLTL+E
Sbjct: 7   PSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDE 66

Query: 183 KDPKRLFEGNALLRRLVRIGVLDENR 260
           KD KRLF+GNALLRRLVRIGVLDE+R
Sbjct: 67  KDEKRLFQGNALLRRLVRIGVLDESR 92



 Score = 92.3 bits (219), Expect = 7e-19
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +2

Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 394
           +MKLDYVLGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIR
Sbjct: 92  RMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score =  133 bits (322), Expect = 2e-31
 Identities = 66/82 (80%), Positives = 73/82 (89%)
 Frame = +3

Query: 3   PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 182
           PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+  R V  VKY LA+IRK ARELLTL+E
Sbjct: 7   PSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARELLTLDE 65

Query: 183 KDPKRLFEGNALLRRLVRIGVL 248
           KD KRLF+G +L+RRLVRIGVL
Sbjct: 66  KDAKRLFQGKSLVRRLVRIGVL 87



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = +2

Query: 332 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHI-DFSLKSPFGGGRPGR 502
           +AGLAKSIHHAR+LIRQR   +  +   IPSF+V     +   +FSLK P    RP R
Sbjct: 115 QAGLAKSIHHARVLIRQRTFVLASRWSTIPSFVVTPGLPEATSNFSLKMPL-RTRPSR 171



 Score = 38.7 bits (86), Expect = 0.009
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = +1

Query: 262 ETRLCAWSED*GLLGASSADAGVQS 336
           E RL A SED GLLGASSADAGVQ+
Sbjct: 92  EARLRAGSEDSGLLGASSADAGVQA 116


>AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p
           protein.
          Length = 181

 Score = 33.1 bits (72), Expect = 0.45
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +2

Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 433
           Q+ L+    +    F  RRL   + K  +++ +  A  LI   H+RV  +++  P+F+V
Sbjct: 91  QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPAFLV 149


>AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA
           protein.
          Length = 181

 Score = 33.1 bits (72), Expect = 0.45
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +2

Query: 257 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 433
           Q+ L+    +    F  RRL   + K  +++ +  A  LI   H+RV  +++  P+F+V
Sbjct: 91  QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPAFLV 149


>AY069336-1|AAL39481.1|  258|Drosophila melanogaster LD05259p
           protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 307 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQA 405
           A   DA V  W  +V P C+N + A  +SCP A
Sbjct: 127 AYDRDARVCMWADQV-PECKNEEVANGFSCPAA 158


>AE014297-401|AAF51920.1|  258|Drosophila melanogaster CG10287-PA
           protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 307 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQA 405
           A   DA V  W  +V P C+N + A  +SCP A
Sbjct: 127 AYDRDARVCMWADQV-PECKNEEVANGFSCPAA 158


>AF070734-1|AAD09748.1|  218|Drosophila melanogaster Gasp precursor
           protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 319 DAGVQSWPGEVHPSCQNFDPAKAYSCPQA 405
           DA V  W  +V P C+N + A  +SCP A
Sbjct: 131 DARVCMWADQV-PECKNEEVANGFSCPAA 158


>BT001789-1|AAN71544.1|   51|Drosophila melanogaster RH23912p
           protein.
          Length = 51

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 463 LSEISIRWRSSWTCQGKNLRK 525
           ++EISI W+  WT Q K  +K
Sbjct: 31  MAEISIEWKEGWTSQTKKKKK 51


>AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-PA
           protein.
          Length = 1320

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 326 VFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS-PFGGGRPGR 502
           +F+  + ++I H +    Q+ +    +  N   FI+ L  G   D S K     GG+  R
Sbjct: 501 LFQGSIGENIRHGKPEATQKEVEDAAKAANAHDFIIALHKGYDTDISEKGVQLSGGQRQR 560

Query: 503 V 505
           +
Sbjct: 561 I 561


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,037,469
Number of Sequences: 53049
Number of extensions: 627145
Number of successful extensions: 1612
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)