Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30189.Seq
(763 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 233 1e-63
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 233 1e-63
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 232 3e-63
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 225 3e-61
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 36 3e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 2.3
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 3.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 9.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.4
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 233 bits (571), Expect = 1e-63
Identities = 119/160 (74%), Positives = 128/160 (80%), Gaps = 5/160 (3%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFETSKYYVTIIDAPGH DFI M TGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 16 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 75
Query: 437 TREHALLAFTLGVKQLIVGVNKMD---PLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVA 607
TREHALLAFTLGVKQLIVGVNKMD P T +++K Y +++GYNPAAVA
Sbjct: 76 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY---IKKIGYNPAAVA 132
Query: 608 FVPISGWHGDNMLEPSTKMPWFXGMASWSV--XEGXADGK 721
FVPISGWHGDNMLE S+KMPWF G W+V EG +GK
Sbjct: 133 FVPISGWHGDNMLEVSSKMPWFKG---WTVERKEGKVEGK 169
Score = 27.5 bits (58), Expect = 0.14
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 214 WVLDKLKAERE 246
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 233 bits (571), Expect = 1e-63
Identities = 119/160 (74%), Positives = 128/160 (80%), Gaps = 5/160 (3%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFETSKYYVTIIDAPGH DFI M TGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 73 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMD---PLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVA 607
TREHALLAFTLGVKQLIVGVNKMD P T +++K Y +++GYNPAAVA
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY---IKKIGYNPAAVA 189
Query: 608 FVPISGWHGDNMLEPSTKMPWFXGMASWSV--XEGXADGK 721
FVPISGWHGDNMLE S+KMPWF G W+V EG +GK
Sbjct: 190 FVPISGWHGDNMLEVSSKMPWFKG---WTVERKEGKVEGK 226
Score = 145 bits (352), Expect = 3e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 232 bits (567), Expect = 3e-63
Identities = 118/159 (74%), Positives = 127/159 (79%), Gaps = 5/159 (3%)
Frame = +2
Query: 260 DIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQT 439
DIALWKFETSKYYVTIIDAPGH DFI M TGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 440 REHALLAFTLGVKQLIVGVNKMD---PLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVAF 610
REHALLAFTLGVKQLIVGVNKMD P T +++K Y +++GYNPAAVAF
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY---IKKIGYNPAAVAF 117
Query: 611 VPISGWHGDNMLEPSTKMPWFXGMASWSV--XEGXADGK 721
VPISGWHGDNMLE S+KMPWF G W+V EG +GK
Sbjct: 118 VPISGWHGDNMLEVSSKMPWFKG---WTVERKEGKVEGK 153
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 225 bits (550), Expect = 3e-61
Identities = 111/157 (70%), Positives = 122/157 (77%), Gaps = 2/157 (1%)
Frame = +2
Query: 257 IDIALWKFETSKYYVTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
IDIALWKFET+KYYVTIIDAPGH DFI M TGTSQADCAVLIVAAG GEFEAGISKNGQ
Sbjct: 73 IDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQ 132
Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSXRKYPHTSRRLGYNPAAVAFVP 616
TREHALLAFTLGVKQLIVGVNKMD + + ++ +++GYN A+VAFVP
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVP 192
Query: 617 ISGWHGDNMLEPSTKMPWFXGMASWSV--XEGXADGK 721
ISGWHGDNMLEPS K PW+ G W V +G ADGK
Sbjct: 193 ISGWHGDNMLEPSPKTPWYKG---WKVERKDGNADGK 226
Score = 145 bits (352), Expect = 3e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 36.3 bits (80), Expect = 3e-04
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +2
Query: 299 VTIIDAPGHXDFIXXMXTGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 478
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 479 QLIVGVNKMDPLN 517
+IV +NK+D N
Sbjct: 247 PIIVAINKIDKPN 259
Score = 25.4 bits (53), Expect = 0.58
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKST 108
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 64 INIVVIGHVDSGKST 108
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 632 RAIQKWARKRQQLGCSPIFLMYEDTSXLISSNLGS 528
+A +KWA + C L +DT ++ +LGS
Sbjct: 652 QAFRKWAADTFAVACETFCLDDDDTLLEVALSLGS 686
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 56 FSLPIFG*SRITNCV*Y 6
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.0 bits (47), Expect = 3.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 464 TLGVKQLIVGVNKMDPLNHHTVSPDL 541
T+ VK I V +DP+ SPDL
Sbjct: 15 TMSVKNEISTVEPVDPVKSLVCSPDL 40
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 298 IVLASFELPESNIDWIPTHAQPLVCPIPKHI*RILY 191
IV+ FE+ +S D A IP ++ R+L+
Sbjct: 54 IVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLH 89
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 661 FG*RLQHVVSVPSRNGHESDSSWV 590
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,321
Number of Sequences: 438
Number of extensions: 4624
Number of successful extensions: 29
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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