Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30181.Seq
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.6  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   2.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   2.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   8.8  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 106 LFFIVFKILLTIKSTVHFINY 44
           +F I F ++++  ST+HF+NY
Sbjct: 199 IFGISFLLIISY-STLHFVNY 218


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 115 ISRLFFIVFKILLTIKSTVHFI 50
           I ++ F+VF  LLT  S+V ++
Sbjct: 2   IFKIHFLVFGALLTYVSSVEYL 23


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 89  QNFINHQKYCSFY 51
           +N+INHQ Y   Y
Sbjct: 369 ENYINHQNYVQGY 381


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 89  QNFINHQKYCSFY 51
           +N+INHQ Y   Y
Sbjct: 317 ENYINHQNYVQGY 329


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 138 YCEISLFPFRDYFLL 94
           YC  SL+P +  F L
Sbjct: 313 YCAFSLYPLKSTFYL 327


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 241 KTFNADDQHNQKLGTP 288
           KTF      N KLG P
Sbjct: 265 KTFTLSSASNAKLGAP 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,064
Number of Sequences: 336
Number of extensions: 2001
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)