Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30181.Seq
         (432 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    23   3.5  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   4.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   8.1  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 183 GHLQITKEKNMNIVKYCEISLFPFRDYFLLFSKF 82
           GH+ I       +V+ C + L+  RDY     K+
Sbjct: 59  GHISIRGRILTGVVRKCIVLLYIRRDYLQFIRKY 92


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -1

Query: 417 YKLTTTANVELGISM*HTQPHNLHRLLSVK*TQLFNFYW*ALRWRP-QFLVMLIIRIE-S 244
           Y +TT   VE GI++ H + + +   LSV     F++    L W P  +  + ++R + +
Sbjct: 60  YNVTT---VETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASYGNLNVVRWDPT 116

Query: 243 LVW 235
           +VW
Sbjct: 117 IVW 119


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 320 CVHFTDKSRCKLC 358
           C+HFTD   C  C
Sbjct: 307 CMHFTDGPDCDRC 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,455
Number of Sequences: 2352
Number of extensions: 7123
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)