Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30181.Seq
         (432 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113254-1|AAM29259.1|  322|Drosophila melanogaster AT14373p pro...    67   1e-11
AE014297-3840|AAN14062.1|  322|Drosophila melanogaster CG4774-PC...    67   1e-11
AE014297-3839|AAF56497.2|  322|Drosophila melanogaster CG4774-PB...    67   1e-11
AE014297-3838|AAF56496.2|  322|Drosophila melanogaster CG4774-PA...    67   1e-11
AE014134-1231|AAN10621.1|  285|Drosophila melanogaster CG31630-P...    29   3.5  

>AY113254-1|AAM29259.1|  322|Drosophila melanogaster AT14373p
           protein.
          Length = 322

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -3

Query: 385 RYFDVTHATAQLAPTFISKVNTAVQLLLVGTTLASPVFGYVDHP 254
           RYFD TH TAQL PT +SK+NT VQL  +G +L +P++ Y+DHP
Sbjct: 244 RYFDATHVTAQLEPTLLSKINTGVQLATIGLSLGAPIWNYLDHP 287


>AE014297-3840|AAN14062.1|  322|Drosophila melanogaster CG4774-PC,
           isoform C protein.
          Length = 322

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -3

Query: 385 RYFDVTHATAQLAPTFISKVNTAVQLLLVGTTLASPVFGYVDHP 254
           RYFD TH TAQL PT +SK+NT VQL  +G +L +P++ Y+DHP
Sbjct: 244 RYFDATHVTAQLEPTLLSKINTGVQLATIGLSLGAPIWNYLDHP 287


>AE014297-3839|AAF56497.2|  322|Drosophila melanogaster CG4774-PB,
           isoform B protein.
          Length = 322

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -3

Query: 385 RYFDVTHATAQLAPTFISKVNTAVQLLLVGTTLASPVFGYVDHP 254
           RYFD TH TAQL PT +SK+NT VQL  +G +L +P++ Y+DHP
Sbjct: 244 RYFDATHVTAQLEPTLLSKINTGVQLATIGLSLGAPIWNYLDHP 287


>AE014297-3838|AAF56496.2|  322|Drosophila melanogaster CG4774-PA,
           isoform A protein.
          Length = 322

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -3

Query: 385 RYFDVTHATAQLAPTFISKVNTAVQLLLVGTTLASPVFGYVDHP 254
           RYFD TH TAQL PT +SK+NT VQL  +G +L +P++ Y+DHP
Sbjct: 244 RYFDATHVTAQLEPTLLSKINTGVQLATIGLSLGAPIWNYLDHP 287


>AE014134-1231|AAN10621.1|  285|Drosophila melanogaster CG31630-PA
           protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 340 FISKVNTAVQLLLVGTTLASPVFGYVDHPH*KSCVELLQ 224
           F SK    V+  + GT + SP+ G ++ PH +   ELLQ
Sbjct: 199 FASKGQRKVEASVPGTPVPSPITGALEAPHFELPQELLQ 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,281,009
Number of Sequences: 53049
Number of extensions: 314821
Number of successful extensions: 508
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)